Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_776292.1 | Gene: | Rcc2 / 108911 | MGIID: | 1919784 | Length: | 520 | Species: | Mus musculus |
Alignment Length: | 452 | Identity: | 119/452 - (26%) |
---|---|---|---|
Similarity: | 194/452 - (42%) | Gaps: | 58/452 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 2961 GSTAGAGAVSTSHEEAAAAPE-QDLPC--TVMVWGLNDKEQLGGLK-----------GSKVKVPT 3011
Fly 3012 FSQTISRLRPIHIAGGSKSL--FIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVK 3074
Fly 3075 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT-TLDKPRLVEALRAKKIRDVACGSSHSA 3138
Fly 3139 AISSQGELYTWGLGEYGRLGHGDN------------TTQLKPKLVTALAGRR------------V 3179
Fly 3180 VQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLS--GIGVVQIECGAQF 3242
Fly 3243 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 3307
Fly 3308 GDN-DHGQQGSGNTFVNKKPAL--VIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRGPVP 3366 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 15/50 (30%) | ||
RCC1 | 3091..3140 | CDD:278826 | 17/49 (35%) | ||
RCC1 | 3144..3194 | CDD:278826 | 20/73 (27%) | ||
RCC1 | 3197..3246 | CDD:278826 | 16/50 (32%) | ||
RCC1 | 3250..3298 | CDD:278826 | 10/47 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 16/50 (32%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Rcc2 | NP_776292.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..78 | 1/3 (33%) | |
RCC1 1 | 101..163 | 8/61 (13%) | |||
ATS1 | 129..479 | CDD:227511 | 97/361 (27%) | ||
RCC1 2 | 166..217 | 17/52 (33%) | |||
RCC1 3 | 219..269 | 17/50 (34%) | |||
RCC1 4 | 271..345 | 21/75 (28%) | |||
Required for interaction with RAC1. /evidence=ECO:0000250|UniProtKB:Q9P258 | 316..323 | 0/6 (0%) | |||
RCC1 5 | 346..399 | 17/52 (33%) | |||
RCC1 6 | 401..445 | 10/49 (20%) | |||
RCC1 7 | 446..499 | 16/53 (30%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |