DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HERC2 and herc1

DIOPT Version :9

Sequence 1:NP_608388.2 Gene:HERC2 / 33035 FlyBaseID:FBgn0031107 Length:4912 Species:Drosophila melanogaster
Sequence 2:XP_017947876.1 Gene:herc1 / 100493988 XenbaseID:XB-GENE-1002062 Length:4854 Species:Xenopus tropicalis


Alignment Length:5678 Identity:1317/5678 - (23%)
Similarity:2054/5678 - (36%) Gaps:1707/5678 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 PDLYLRPLPFLDAKWLRADLIASLRNAADGAVLWNHLIQDCELVSSPTAPLLNARGQLSYLGDDG 133
            |.:.|:.|..|::.|:..| ..|:......::|:..||.:.|:|..|                  
 Frog     6 PPVKLKWLEHLNSSWITED-SESIATREGVSLLYAKLISNKEVVPLP------------------ 51

  Fly   134 KHYCGAQQLKCSCCQPEYCGP------LSACNCDGCRPLDSDTAIKKLTTQAAAQQAAHLSQATD 192
                  ||:.|      ..||      ..:.:||                    :|..:|    |
 Frog    52 ------QQVLC------LKGPQLPDFERESLSCD--------------------EQDHYL----D 80

  Fly   193 MVLSGWLWSQPPSQQARLDCQRSMISELQELALRAAGNCLSAQHLRQQLFIYERYFVAL------ 251
            .:||..|      ..|::.|..|..                |..||::|.:.:|.|.||      
 Frog    81 ALLSSQL------ALAKVVCSDSPF----------------AGALRKRLLVLQRVFYALSNKYHD 123

  Fly   252 KRERERERKSTTSAQAVASVTTANTTIAATTANAAVESQPAEQQAEHGALGLARVATHAALNFSF 316
            |.:.::::.|..::..     :|:|.:.:....::.::             |..:.....|:..|
 Frog   124 KGKVKQQQHSPENSSG-----SADTLLISERPRSSTDA-------------LIEMGVRTGLSLLF 170

  Fly   317 AFLRRAW---RSGEDTEMCSELLSEALASLQELPEATLFEAAVVSSLWLEVMERSIKFLRLVAL- 377
            |.||::|   .:|....:|::::..|:..:..||..:|...:.:..:.|:.:.:...||:.|.: 
 Frog   171 ALLRQSWMMPAAGPGLSLCNDVIQTAIDVVNSLPPLSLANESKIPPMGLDCLSQVTSFLKGVTVL 235

  Fly   378 ---GDPMGNRCTAPLNDRHTALCLLLELGVQKGTLAATLECVVLLL----LLWEKDRAGNDNRDM 435
               .|.:|.|..:.         |||.|..|:|:|...||.:.:.|    |:.|.|:    |:.:
 Frog   236 NSGADILGRRLASE---------LLLGLASQRGSLRYLLEWIEMALAASALVGETDK----NKML 287

  Fly   436 PRKTG--------APLQRILLRYQKIGATAKGGGIAGGEPAPVASATETFLRFLSLPKSSAAIVD 492
            ..:.|        :.||::   .:.:|::|...  ...||.                ::|..:..
 Frog   288 TAQEGMISCDCFMSILQQM---RRSLGSSADRS--QWREPT----------------RTSDGLCS 331

  Fly   493 LRRAAVVIISHLDRMVQPLMPRCL----LRGGQATAASSSSAPQQRIYALGWPSLSKDQ-----Q 548
            |..||:.:...:.:|.......|.    ::.|:....|.:.    .:|.  |.|.|..|     |
 Frog   332 LYEAALCLFEEVCQMASDYSRTCASPDSIQSGENPVVSETC----EVYV--WGSNSSHQLVEGTQ 390

  Fly   549 GFSAEPTLSWSGESAGVPTLS----------CRFQIK---QVACCETQMLILSQEGKLYTWRLAK 600
            ....:|.|:        |..|          |.|.|.   .|..|          ||....||..
 Frog   391 EKILQPKLA--------PCFSDAQTIEAGQYCTFVISTDGSVRAC----------GKGSYGRLGL 437

  Fly   601 PEA------EPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659
            .::      :.|..|.......:|.:...:| |.||..:....:|||.|:..:||||::..:..|
 Frog   438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG-HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP 501

  Fly   660 TKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV 723
            ..| ..|:...|..|..|..:|||:|..|.|.|||.|.:.|||||:|:.|::||||..:|:  |.
 Frog   502 KLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VG 564

  Fly   724 DVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV--QRVFAGSQFSV 785
            :|:.||  :|::||:.:| .|:::|.||.||||:|:.|...:|.:||:|..:  ::|.||||.|:
 Frog   565 EVSCGS--SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSL 627

  Fly   786 ALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 850
            ||:|.||:|.||...|||....|.:...   |:|:..|...||||:::..:||||||...||:.|
 Frog   628 ALTSTGQVYAWGCGACLGCGSSEATALR---PKLIEELAATRIVDISIGDSHCLALSHDNEVYAW 689

  Fly   851 GRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWT--QSSHQGVPRRAPFVVDL 913
            |.|...| |....|:.|:.:...:..|.......|:..::.||.||  ....|.|....|:.|||
 Frog   690 GNNSMGQ-CGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL 753

  Fly   914 GEPTFRLLDQLLGMCSSQDNRQTP------NQESECIAVACLNLFRLQLLALIANGVEPRQVGLA 972
            .|.||..|...|.....:.|.:.|      :::.......||.:....|...:|.||....:|..
 Frog   754 EESTFFHLRSFLERYCEKINSEIPPPPFPSSRDHHGFLKLCLKMLSNHLALALAGGVATSILGRQ 818

  Fly   973 SGSRLLCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPG--QA 1035
            :|.  |.:|..|::    .:.|...||....:.|..|.::|||...||.:.|.||||..|.  ::
 Frog   819 AGP--LRNLLFRLM----DASVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWES 877

  Fly  1036 SSAGHRFMTDLLVSSLMAEGGLESALQHAIRLESSSCSADCGDGVHLP----------------- 1083
            .|.|.|...|::::||...       .|...|...|..:|..|...||                 
 Frog   878 LSKGQRMQLDIILTSLQDH-------THVASLLGYSTPSDSSDVTSLPMTSDPSYSSQGSHPDTH 935

  Fly  1084 LLQLITRLLSNNAALSQTRLSPTLGKQQEK------EEEEREQQHQEPSTSPSLSLLHRFQRLLL 1142
            |.:::.:.|..|......:....|.|..:|      ..|..:..|..       .||...|:.||
 Frog   936 LAEILMKTLLRNLGFYTDQAFGELEKNSDKFIVGASSSENSQPAHLH-------ELLCSLQKQLL 993

  Fly  1143 SHIHQAQPEEETTGAEALLLQYMHALIPACVATLQKAHELALQCREPGENSFGQMVGHLGRVLQA 1207
            ::.|.....|.::.. |||.:::..|:|.  ||...:....|....|...|.|:   .|..|:..
 Frog   994 AYCHTNHISENSSSV-ALLHKHLQLLLPH--ATDIYSRSATLLEESPWNGSVGE---KLRDVIYV 1052

  Fly  1208 DISDALLNELLVGLLLLKRD--RPQCLGGLRWARLFLPLLRVLDRLNRALGEGELRDGDDMGWPG 1270
            ..:.::|.:|:..||||...  ||       .....|.||..||||||.|....|.:..::.|| 
 Frog  1053 SAAGSMLCQLVNALLLLPASVARP-------LLSYLLDLLPPLDRLNRLLPAAALLEDQELQWP- 1109

  Fly  1271 IICRGGPK----GGPPPADPETHYVRRADMEN--LLLDGSRCIILAGYVCDLSGYNCESETLRSV 1329
              ..|||:    ||.....|...:|...|:|.  .||.| ||         |.|           
 Frog  1110 --LHGGPEHIDPGGVSLPAPAQSWVWLVDLERTVALLIG-RC---------LGG----------- 1151

  Fly  1330 LDSGLGKDLTAEMSSQVHRTAMEHILEHHKLGKYMVQ---ASTEEKSSAPGPSRLTHFSSECALA 1391
                                              |:|   ||.||:.        |::       
 Frog  1152 ----------------------------------MLQGSPASPEEQD--------TNY------- 1167

  Fly  1392 QLLGLVANLMCSGPALQPAELQCRQLDK--SSLLSGGLQLLQPSNPFDEEKGEARSSHSCHSTAG 1454
               .|...|..:|     .:::..||||  |:||...|...:....||                 
 Frog  1168 ---WLKTPLFGNG-----IDMEVPQLDKCMSALLEVSLSGNEEQKTFD----------------- 1207

  Fly  1455 NTPTELPPPLPMQQQLAPGRGKSQLQLRADAFISGLAEARVSEPPVAAWLALTERYCKAHNLMWH 1519
               .:|.|.:.:...||.|..|                    ||....|:::.: |..:.:  |.
 Frog  1208 ---YKLRPEVSLLVDLAVGSTK--------------------EPAQNLWISMQD-YAISKD--WD 1246

  Fly  1520 Q-EFATEHPVQELERLLSAVLIRHQYLGGLVLNA-LETEVPPPRQLGEIIRLVHQAKWSVVRTRQ 1582
            . ..:.|..:..:.|.:.|.|::|.   ||:..| :::...|.:.|.|:.|.|::.:..::..: 
 Frog  1247 SATVSNESLLDTVSRFVLAALLKHT---GLLSQATVDSRYQPEKSLAEVYRNVYKVRSRLLACK- 1307

  Fly  1583 QLNRSYKEVCAPILERLRFLLYEVRPAISPQQRGLRRLPILQRPPRFKMLVRRLLQELRSSRQPA 1647
              |....:.|:...|                                     |.:.|.:.|....
 Frog  1308 --NMELIQTCSSSRE-------------------------------------RWVSENQESGDLG 1333

  Fly  1648 KPEDLLNASIQQEQEKKPQSMPKQE---LEEQEEEETLLRRLNERQIHGEGELDPALM--QDIVD 1707
            ..|:....:|.:|.|.:.|:...:|   .|::||:|.     .|.:|...|::....:  :|:..
 Frog  1334 SQENSFTRTIDEEAEMEEQADRDREEGHTEQEEEDEE-----REHEILTAGKIFQCFLSARDVAR 1393

  Fly  1708 FALQDSCDVETARRA---MYCQMQRYQLRLAGLQIVQQLLELHGLLDAAQYSLLNG----FLGL- 1764
            ...:|.....:|..:   :....|..|| :.|.:..:.|.|...|...|..|:::.    .||: 
 Frog  1394 NRERDRMSTSSAADSGPGLRADEQPQQL-IQGRRDSRHLAEGQDLYTGACNSVIHRCALLLLGVS 1457

  Fly  1765 ----HLKSTSS--------GGGSTGSGS------------SLHVLGQLNMISAYQKARLLLAQSR 1805
                ||::||.        |....|:.:            |:||.....:|.:..::.|...:|.
 Frog  1458 PVIYHLENTSEDSHEQTVPGCSQEGTAAMTRSESLTAERRSVHVHPSYRLIKSRSESDLSQPESD 1522

  Fly  1806 VLDWAVRELRRLVNQEQQGHARGKDSTNLGTYVLLKRLPRAR----FLLSVF--------GLLAK 1858
            ...:.: ..|:..:.:...|.:....|:..|.....||..||    ...|||        .|...
 Frog  1523 EEGYLL-SARQNTDFDLTSHRKRGSPTDPPTSDSWSRLKHAREWPSSSASVFDSDVEYGKSLSVH 1586

  Fly  1859 ELGPNELGFLINSGLLGTVLGLLAQTGGEGATGG-----------QVHGELSI--LYEDSVL--- 1907
            .|..|.|.|:  ||.:|:..|.  :...||.:..           |:..||.:  |::..||   
 Frog  1587 TLVDNVLSFV--SGDIGSSPGF--KEPEEGMSSSPQACIVAMEQQQLRAELRLEALHQILVLLSG 1647

  Fly  1908 ------KQKSSKAQLSGP-------------------DLAKLMKIGTRIVRGADWKWGD------ 1941
                  .|.....|...|                   .|..:..:||:         ||      
 Frog  1648 MEEKENMQSLGNRQAPAPFQSSSLLTSVRLQFLAGCFGLGTVGHVGTK---------GDSVHLHH 1703

  Fly  1942 -QDGNPPGEGRIISEVGEDGWVRVEWYTGAT-------NSYRMGKEGQYDL------------QL 1986
             |||....:..|..|: :....::.....||       |.:.:  |.|..|            |.
 Frog  1704 YQDGIRASKNSIQKEI-QKAVHKIYQQLSATLDRALQANKHHV--EAQQRLLLVTVFALSVRYQP 1765

  Fly  1987 ADSALNVASPTEPEREDVSGSEAS--------PTSD-SHPSKLLRHCAAKLLQILAVGTGLHGAQ 2042
            .|.:|.:::........:.|::..        |.|. |..|..|:..:.:||||||:.||.:..:
 Frog  1766 VDVSLAISTGLLSVLSQLCGTDTMLGQPLQLLPKSGVSQLSTALKVASTRLLQILAITTGTYADK 1830

  Fly  2043 LDKDALR-----------------GMTSM-----------------------FRTIIYPKPSMSN 2067
            |....::                 |:|.|                       ||..:..:.:.. 
 Frog  1831 LSPKVVQSLLDLLCSQLKNLLAQAGVTLMSSCNAEEEGDRKADLTGEIDRKDFRASLRKQRTAE- 1894

  Fly  2068 ISYALGWLNLG----FIRAISGDCPRLCLELSTPGWLSHYLSLLEQP-------AGNEAGVYRQL 2121
                   |:||    |:|.:... ..:..::::|.|....|::..|.       .||   :..:|
 Frog  1895 -------LHLGDFLVFLRRVVSS-KAIQSKMASPKWTEVLLNIASQKCSSGLPLVGN---LRTRL 1948

  Fly  2122 HCLRLLQLILAQWGAE-EEPRMPALVHQLFATLGRIALHCPGDASLLPTAEGKARVLL------- 2178
            ..|.:|:.:|....|. |:.:|..:|.:||:.|.    .|..||   |.|:.|..:.:       
 Frog  1949 LALHVLEAVLPACEANVEDDQMAQVVERLFSLLS----DCMWDA---PIAQAKHSIQIREKEQET 2006

  Fly  2179 TASHSGSVAEELVALLRRLHTLP----SWNPVINSFLAQKLCVAAELLAEQSHSTALDSEQVFVL 2239
            ..:.:|.|.||       ...||    |::|                  |:.....:::.|:...
 Frog  2007 KLNKTGEVEEE-------EEDLPIQEVSFDP------------------EKVQCCVVENGQILTH 2046

  Fly  2240 GVLGAMGGHDLRPRVGLHCFHEGSHMVIASFTPKGRCLLAPGGVGSGVGFVKVQLPAVMPHLDHT 2304
            |..|...|                              ||..||.||....|..:.......:.|
 Frog  2047 GSGGKGYG------------------------------LASTGVTSGCYQWKFYIVKENRGNEGT 2081

  Fly  2305 VFSLSRLPMNEM---------LLNAWTVLLYGPAPELRELPSSADGRLDLALL------------ 2348
            ...:||.|:::.         |..|::..||....:...|||...|.....:|            
 Frog  2082 CVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLPSFTQGDFITCVLDMEARTVSFGKN 2146

  Fly  2349 --------------------------RAQQLQMAVLHTNG-----------------VLYRHQVA 2370
                                      ..:::::..:...|                 ||....|.
 Frog  2147 GEEPKLAFEDVDAGELYPCVMFYSSNPGEKVKICDMQMRGTPRDLLPGDPICSPVATVLAESSVQ 2211

  Fly  2371 LRRILKQ-----------------------RAPGS-IYASPDEPDRSDAESQQPGEQDQQLSSGS 2411
            |.|||.:                       |..|| :..|.....|.:.|::...|:|:......
 Frog  2212 LLRILHRTERWTYCINKKMIERLQKIKGCLREAGSKLKKSRSVQSREENETRDDREEDKGKHGRH 2276

  Fly  2412 G----QEPQLLIQCILLRATQASPVKACYSYMDLA-TAALNCIQSLATQAHQELSEGGGVPPNGR 2471
            |    .||||...|:     :..||.|....:|.. .....|:.. .|..|..|.   ||...|.
 Frog  2277 GLADLGEPQLRTLCV-----EVWPVLAVIGGVDTGLRVGGRCVHK-QTGRHATLL---GVVKEGS 2332

  Fly  2472 ------------ALSSP----PQPTMVHGVPVYNVARKEQKPSEQVEQKSKWPAAATDAQLIGQI 2520
                        .:|.|    |..|     |:||:...:..|.:....:....:|..|...:..|
 Frog  2333 TSAKVQWDEAEITISFPTFWSPSDT-----PLYNLEPCDPPPFDVTRFRGLTASALLDLTYLTGI 2392

  Fly  2521 ME----MGFTRRTVELALKQLSLQAEIMP-------TPEQIVQWILEHPDVCANTI-----EEDT 2569
            .|    :| .:|..:....:...:.:|.|       |..||.:      |..:|.|     .|..
 Frog  2393 HEEPGKVG-AKRHEKKHRHESEEKGDIEPRGDADIATEVQITE------DAKSNNIVPKLENESG 2450

  Fly  2570 LPLASSAS------SHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGPAPPVKFESRKDFQ 2628
            .||..:|.      |.|.:..|.:..|.|:         |..:.:..||.               
 Frog  2451 PPLGETAQVDIQHHSTDGKRKSHDHIPRSH---------DVAQSEIRAVQ--------------- 2491

  Fly  2629 TADLYALYVR-GLVRPGMTVRCCRDFEEIKQGDMGTVLIVDTEGLHDLNVQVDWRNHGSTYWVC- 2691
                 ..|:. |.::...|:..|..:.|         |::..:.|.|       ..|.|.   | 
 Frog  2492 -----LSYINLGAMKSLGTLLSCSKYAE---------LLLIPKVLAD-------NGHNSD---CA 2532

  Fly  2692 ---FVH--IELVEAAQ---THHQPR-----PPPIAVGARVRLRTSSLRY-----GML-------- 2730
               .||  :|:..|.|   .|...|     |...|:|.....|..::.|     |:|        
 Frog  2533 SSPVVHEDVEMRAALQFLMRHMVKRAVMRSPIKRALGLADLERAQAMIYKLVVHGLLEEQFGSRL 2597

  Fly  2731 ------------------CPLRLGRSQGSSAIGVVSSVRSKQL---------TVDFPDQPAWQGH 2768
                              .|:....|..|:...:.||:.....         ||...:.|.....
 Frog  2598 RQELEQQAEETDQAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPL 2662

  Fly  2769 INEVELVASQPTSATLPSLGDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKHLLNGSNQPWQSC 2833
            ....::.:|.||:..||:   ..:|.||          |.||..|..:..      |..|...|.
 Frog  2663 SLLRQMFSSYPTTTILPT---RRAQTPP----------ITSLPTSPTDEV------GRRQSLTSP 2708

  Fly  2834 SSGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGASRVL 2898
            .|.|.||..|..|.|    .|..|..||...:.:..|||  :|..:..:|:    .:.|..:|..
 Frog  2709 DSQPTRHTNRAALSD----PSSRLSTSPPPPAVVVPLLE--MGFSIRQIKK----AMEATGAREA 2763

  Fly  2899 LMQQVPTYYPWVEVVVKQCQNNGIQCKIHGIKFVGRRQQPDLQHILANAQFLASEYSAGVGPGST 2963
            ..|.:.....|:           |:......:|.||..:        ..|               
 Frog  2764 DPQNITVLAMWM-----------IEHPDDEERFSGRTTE--------QCQ--------------- 2794

  Fly  2964 AGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI---- 3024
               |||||:|                              |.|.....::..||...|..:    
 Frog  2795 ---GAVSTAH------------------------------GGKSSDTAYTGDISSSDPAEMEECF 2826

  Fly  3025 AGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
            .|...||......|.  :.|:.:.||..:.......|..:..:.|..:|.|.....|..:   ||
 Frog  2827 CGSPDSLEHTENAGA--SSGQQSRGRSTVTRRQKFDLAARTLLARAEIVLKWMSQLGPNN---LT 2886

  Fly  3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGL 3151
            ::..::                     |.|:|.|.:..|:         .:|.|   |.||...|
 Frog  2887 VNAGLY---------------------RTVQAHRNQGRRE---------GVSLQQDPGALYDLNL 2921

  Fly  3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3216
            .|       :....|..:.:.|:.|             |.||          .|.|.  ||....
 Frog  2922 DE-------ELEIDLDEEAMEAMFG-------------QDLA----------SDNDI--LGIWIP 2954

  Fly  3217 EGSDTP--HEIERLSGIGVVQIE-CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIG 3278
            |..|.|  |..|......||..| |.|          .|.::            :||:::..|..
 Frog  2955 EVLDWPTWHVCETDDREEVVICELCEA----------SVLSF------------NQHMKRYHPGC 2997

  Fly  3279 GLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTF---------------------V 3322
            |....|..:.:.|:          .|..|..   |:.||||.:                     .
 Frog  2998 GHSANRQGYRSNGS----------YVDGWFG---GECGSGNPYYLLCSSCREKYLSLRSKRKATA 3049

  Fly  3323 NKK-----PALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRG------------------- 3363
            ::|     |.|:...|:|:..          .|.:.:...||:..|                   
 Frog  3050 SEKYKGHAPDLIGKQDSVYEE----------DWDMMDVDEDEKLTGEEEFELLAGPLGLNERRMV 3104

  Fly  3364 --PVPFSSTRDPLGGSSLGIYEAETM-QTLKQ-------EAKPLNQSSLSE-SLALETPAARQAA 3417
              ||.|..: ||||.|...:....:| :||.|       |.....:.:|.| :.||..|..|..|
 Frog  3105 PEPVQFPDS-DPLGASVAMVTATNSMEETLMQIGCQGTLEKSSSGRITLGEQAAALVNPHDRVMA 3168

  Fly  3418 LGHVLRAMSILQARQLIVAALTSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQLAETIAQGGGEA 3482
            |..|:.|..:|.||.:::.||:..|         |.|....|..| :....|....|:.:  ...
 Frog  3169 LRRVIAAAQVLLARTMVMRALSLLS---------VSGSSCSLAAG-LESLGLTDIRTLVR--LMC 3221

  Fly  3483 PADATDAGLQEHSPEAAVDALTGGMSG-GANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALPQH 3546
            .|.|..|||.. ||...:.:.:....| .:.|..|:|.  |:...:..|.|:.|...::..|.|.
 Frog  3222 LAAAGRAGLST-SPSTTLPSSSERSRGLHSKTSKPISC--LAYLSTAVGCLASSTPSAARLLVQL 3283

  Fly  3547 KHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEPE---AKSLVELL---------- 3598
            ....:.::|..|...|:....:.....|...|:.:...|:..|.   .::||.||          
 Frog  3284 CTQNLISAATGVNLTTVDDPVQRKFLPSFLRGIAEENKLVTSPNFVVTQALVALLADKGAKLRPN 3348

  Fly  3599 ----------------KLAVCGRCGPPSTS------------------------QTIAD------ 3617
                            .||.|......|:.                        ||:||      
 Frog  3349 YDKAEMEKRGPLELANALAACCLSSRLSSQHRQWAAQQLVRTLAAHDRDNQTAPQTLADMAGDLR 3413

  Fly  3618 --TLISLGAGTPAVAA-----------------------------MLLETCI-------TELED- 3643
              :...|.|....|.|                             .|.:||:       ||..| 
 Frog  3414 KCSFTKLEAHQNRVTASVWCSKKDLLATSGSDGTVRVWNVSRTQYSLQQTCVFHKMEGSTEETDP 3478

  Fly  3644 ----LCTS---RHCLGKLPKPV----------MQESSHPYV-------DNVNVT----------- 3673
                :|.|   |:..|.|.|.:          :.::...:|       :|....           
 Frog  3479 SLSLICWSVSGRYLAGALEKTINIWQVNGGKGLVDAQPHWVSALTWPEENSGAAWTSDAPESLLV 3543

  Fly  3674 -------GVVRIPGA-EMLRLEFDSQC------------STEKRNDPLVIMDGT----GRVLAMR 3714
                   |::.:..| .|.|:|.: .|            .:|.|:..:...||.    .|.:|.:
 Frog  3544 GRMDGSLGLIEVTDASSMQRMELE-HCYRKEVAVTCIAWYSEDRSFAVGYSDGKLLIGNRDIAEK 3607

  Fly  3715 SGREF--AH--------WAP------------EIRVLGDE-LRWK----FSSDSSVNGWGW---- 3748
            :|...  ||        |.|            .:::.|.. |.||    .|..|.||...|    
 Frog  3608 AGIVIIDAHKDMIVSMKWDPTGQMLLTCAKEETVKLWGKSGLSWKTLYCLSHPSLVNTAAWCSLV 3672

  Fly  3749 -------------------RFWV------HAIMPAATLGESGSDRAV------------------ 3770
                               ..|:      ..:.|.::..:...::|:                  
 Frog  3673 GNGERPQLMLGTGCQSGLVCVWIIPQIPQEGVQPKSSASDDWKEQAISKEMFRKVEYVRCVFKLR 3737

  Fly  3771 ----------LSQPSMALVMSLLDSRL---APRQPSVLLRLASALAACSQLGALTTAQRIWS--- 3819
                      .|...:|||...|...:   :.:..|||..:.:.      .||:||.  :|.   
 Frog  3738 GHITPVRTVAFSHDGLALVSGGLGGLMNIWSLKDGSVLQSVVTG------SGAVTTT--VWIPDV 3794

  Fly  3820 ---------------------LRKLHAVLLLEQAPRPQD-------PSLSTLLQPLIPELLRQYE 3856
                                 |...|.:.....|.:.|.       |.:.|.|:.|...|..||.
 Frog  3795 GVAACSNRSKDVLVVNFTPEWLSSNHVLATCRTALKQQGIVGLNMAPCMQTFLERLPVMLQEQYA 3859

  Fly  3857 YEEPQVRGGIHLMHSDYFKTLAALACDMQLDAAL---PATSSSSSSSAAPGAISSTGDVHKWAWF 3918
            ||:|.|..|..|:||.|.:.||:||..:.||..|   |.......|...|.:.:.|    :|.|.
 Frog  3860 YEKPHVVCGDQLVHSPYMQCLASLAVGLNLDRLLCNPPVPPHHYPSPPDPASWNPT----EWVWL 3920

  Fly  3919 KRYCIAVRVAQSLIRRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQSPGASMLNSTTSLSSS 3983
            :.:...::.|::|.|.::.|..|                                          
 Frog  3921 ECFSTTIKAAEALARGSQFPECF------------------------------------------ 3943

  Fly  3984 TVSNVSPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGA 4048
            ||.::.|.|            ..:|:     |..|::.:....|.|::.|...:|:||.|  ||.
 Frog  3944 TVPDLEPVP------------EEELK-----LVMDNSKWNNGTDEQIMSWATSKPEDWHL--GGK 3989

  Fly  4049 STIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGR 4113
            ..::.||....|||.  |..| ....|..|.|..:..|:..|:...|.:..:|.:.|.|.||.||
 Frog  3990 CDVFLWGAGRHGQLA--EAGR-NVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 4051

  Fly  4114 LGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGK-HCLALTTEGEVYAWGEGEDGKLGHGNRMSYD 4177
            ||.|.||...:.|::.:||...|.::..:.|.. |.:|||..|||::||:|:.|||||||.....
 Frog  4052 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR 4116

  Fly  4178 RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRA 4242
            ||:.:|.|.|..|..::||..|||.:||.|.:.|:|.|.|||||.|::.::..|:.|.||.|...
 Frog  4117 RPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHI 4181

  Fly  4243 IDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 4306
            ..:|||..  .||.::.|.: ||::|||||||||.|.|.....|.|::.|.|:|:.||.||:|||
 Frog  4182 GQVACGLN--HTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4244

  Fly  4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
            |||||.|.|||:|:.....|..|...:..||:.|..|.|..|..||.|:.|.:|.|.|||||.||
 Frog  4245 VALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWG 4309

  Fly  4372 DNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNP-------- 4428
            .|.|||||.|....::.|.||.|||||:|.:::.|..|:.|.:.:.:..|...:..|        
 Frog  4310 SNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTAAPVPPRAPGVAVPLQLGLPDV 4374

  Fly  4429 -PLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGD--------------LSLGALKDV 4478
             |.:|..::|:....:.|||.||:|||:|:.....:|.:|.:              :..|.|:.:
 Frog  4375 IPPQYSCLKDICLHTVRARLRLLYHFSDLMYSSWRLLNLSPNNQSSASHYNAGTWGIVQGQLRPL 4439

  Fly  4479 LVYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLL 4543
            |...:......:.|..|||:.|.:||.|.:.||.. |.| :|         |.:|.|:.:::..|
 Frog  4440 LAPRVYTLPMVRSIGKTMVQGKNYGPQITVKRIST-RGR-KC---------KPIFVQIARQVVKL 4493

  Fly  4544 TQEALALPHRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFL 4608
            ....|.||.|.||||.|||..||.||.:.::|.|||.||:.|.|.|||.:||...|.|.|||.||
 Frog  4494 NASDLRLPSRAWKVKLVGEGADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFL 4558

  Fly  4609 LDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 4673
            |:|:......:..|:|||:|||:|:||..||.::||..||:||....|...||.|||..||..|.
 Frog  4559 LNPSSGLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCIPLTLEDLEEVDLLYVQTLN 4623

  Fly  4674 CIRNMDD----DPKLFTALEL-PFSTSSARGHEVPL--STRYTHISPRNRAEYVRLALGFRLHEF 4731
            .|.:::|    :......:.| .|...||.|..||:  ......::..||.|||..|:.:||||.
 Frog  4624 SILHIEDSGITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVDRAIDYRLHEM 4688

  Fly  4732 DEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSALVTWFWEV 4796
            |.||.|||:|||.:||||||||.:|.:|:.||||.|:|.:.:||.|..|:..|....||.|||:.
 Frog  4689 DRQVAAVREGMSWIIPVPLLSLLTARQLEQMVCGMPEISVDVLKKVVRYREVDEQHQLVQWFWQT 4753

  Fly  4797 MEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSC 4861
            :|||:|:||.||:|||.||:|||...||...|   .|:::.:.|...||.|.||||.|::|.||.
 Frog  4754 LEEFSNEERVLFMRFVSGRSRLPANTADISQR---FQIMKVDRPHDSLPTSQTCFFQLRLPPYSS 4815

  Fly  4862 KAVLLEKLKYAIHFCKSIDTDEY 4884
            :.|:.|:|:|||:.|:|||.|.|
 Frog  4816 QPVMAERLRYAINNCRSIDMDNY 4838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HERC2NP_608388.2 RCC1 638..683 CDD:278826 16/45 (36%)
RCC1 687..737 CDD:278826 23/49 (47%)
RCC1 740..787 CDD:278826 21/49 (43%)
RCC1 790..841 CDD:278826 19/50 (38%)
RCC1_2 828..857 CDD:290274 14/28 (50%)
Cyt-b5 1290..1363 CDD:278597 10/74 (14%)
MIB_HERC2 1928..1987 CDD:284184 16/84 (19%)
UBA_HERC2 2515..2559 CDD:270585 9/54 (17%)
Cul7 2624..2699 CDD:288381 14/81 (17%)
APC10-HERC2 2762..2932 CDD:176485 37/169 (22%)
RCC1 3037..3088 CDD:278826 9/50 (18%)
RCC1 3091..3140 CDD:278826 5/48 (10%)
RCC1 3144..3194 CDD:278826 10/49 (20%)
RCC1 3197..3246 CDD:278826 14/51 (27%)
RCC1 3250..3298 CDD:278826 7/47 (15%)
RCC1 3302..3350 CDD:278826 12/73 (16%)
RCC1_2 4136..4166 CDD:290274 12/30 (40%)
RCC1 4154..4203 CDD:278826 24/48 (50%)
RCC1 4206..4257 CDD:278826 20/50 (40%)
RCC1 4260..4309 CDD:278826 27/49 (55%)
RCC1 4312..4360 CDD:278826 17/47 (36%)
RCC1 4364..4413 CDD:278826 25/48 (52%)
HECTc 4509..4880 CDD:238033 167/377 (44%)
HECTc 4553..4878 CDD:214523 154/331 (47%)
herc1XP_017947876.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.