DRSC/TRiP Functional Genomics Resources

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Protein Alignment HERC2 and herc2

DIOPT Version :9

Sequence 1:NP_608388.2 Gene:HERC2 / 33035 FlyBaseID:FBgn0031107 Length:4912 Species:Drosophila melanogaster
Sequence 2:XP_012813154.2 Gene:herc2 / 100487407 XenbaseID:XB-GENE-1012659 Length:4848 Species:Xenopus tropicalis


Alignment Length:5194 Identity:2239/5194 - (43%)
Similarity:2972/5194 - (57%) Gaps:734/5194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DAKWLRADLIASLRNAADG-AVLWNHLIQDCELVSSPTAPLLNARGQLSYLGDDGKHYCGAQQLK 143
            |:|||:.||  .|....|| ..|||.:::|               |::.|.|.|..........|
 Frog    15 DSKWLKTDL--QLAFTRDGFCSLWNEMVKD---------------GEIVYTGTDATQTGDLPSRK 62

  Fly   144 CSCCQPEYCGPLSACNCDGCRPLDSDTAIKKLTTQAAAQQAAHLSQATDMVLSGWLWSQPPSQQA 208
            ....:.:          ...:..|.:...||...:..|.     :.....::..|:|.:.|....
 Frog    63 DEINEAQ----------SSSKKEDQNDKEKKEDDEILAP-----NYKAKTIMESWVWGRQPDVNE 112

  Fly   209 RLDCQRSMISELQELALRAAGNCLSAQHLRQQLFIYERYFVALKRERERERKSTTSAQAVASVTT 273
            ..:|..:::.|.|.||.:.|...|||..::|:|.|.||||:||.|                  |.
 Frog   113 LKECLYTLVKEQQLLAAQTAKTTLSAMRMKQRLVILERYFIALNR------------------TV 159

  Fly   274 ANTTIAATTANAAVESQPAEQQAE------------HGALGLARVATHAALNFSFAFLRRAWRSG 326
            ...|:.....:::|....||:::|            .|..|||||.:.|||:|:|||||||||||
 Frog   160 FQDTVKVKWKSSSVPQPSAEKKSEDMFHVHSSRPVGQGVEGLARVGSRAALSFAFAFLRRAWRSG 224

  Fly   327 EDTEMCSELLSEALASLQELPEATLFEAAVVSSLWLEVMERSIKFLRLVALGD--------PMGN 383
            ||.::|||||.|:|.:|:.|||||||:...|||:||||:||:.||||.|. ||        ..||
 Frog   225 EDADLCSELLQESLDALRALPEATLFDEGTVSSVWLEVVERATKFLRSVT-GDVHSTQSPRSPGN 288

  Fly   384 RCTAPLNDRHTALCLLLELGVQKGTLAATLECVVLLLLLWEKDRAGNDNRDMPRKTGAPLQRILL 448
               .||.|:|.||.:||||.||:|||:..|..|:|||.|||......||....:.|.|||..:|.
 Frog   289 ---IPLQDQHLALAILLELAVQRGTLSQMLSAVMLLLQLWESGTKETDNERSAQGTSAPLLPLLQ 350

  Fly   449 RYQKIGAT------AKGGGIAGGEPAPVASATETFLRFLSLPKSSAAIVDLRRAAVVIISHLDRM 507
            |:|.|...      .|...|...:.:|    .|.|||:|.||:.:...:|||:.||||::||||:
 Frog   351 RFQSIVCNKEIHNMEKEMQILSCQLSP----NENFLRYLILPQDNELAIDLRQTAVVIMAHLDRL 411

  Fly   508 VQPLMPRCLLRGGQATAASSSSAPQQRIYA---LGWPSLSKDQQGFSAEPTLSWSGESAGVPTLS 569
            ..|.||      .|.::.:|.....|.:.:   |||...:........|..              
 Frog   412 AAPCMP------PQCSSPTSHKGALQEVISWGLLGWKYYANVSGPIQCEAL-------------- 456

  Fly   570 CRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSN 634
            ....:.||||.|...||||:.|||||.........|..::.:|....:.||.|.:|:|:||:.:.
 Frog   457 ANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSAT 521

  Fly   635 HNAYSWGTGEDHRLGHGDTHARAVPTKIAAL--EQHCVQSVY--CGCSYSAAITCGGNLLTWGRG 695
            ...:|||.|:..|||||||.:...|..::||  :|...|.::  ||.:||||||..|.|.|||||
 Frog   522 SELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 586

  Fly   696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCN 760
            .|.|||||:|:|:::|.||..|....||||:.|||||.:|::|..|.|::||||||||||.|..:
 Frog   587 NYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSD 651

  Fly   761 GSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKA--TCLGHQLVERSVQGCSVPRLVS 821
            |...|.|:|.|.  .:.:|..|||||:|::.:||:|:|||.  ..|||...|.    ...|::::
 Frog   652 GCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEH----VRYPKIMN 712

  Fly   822 SLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIA 886
            .||.|::|||||...|||||:.||||:.||.||..|.......::|:  ..:|..|.:....||:
 Frog   713 GLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPV--PSVLPGLDSKHIVGIS 775

  Fly   887 CTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLL-----GMCSSQDNRQTPNQESECIAV 946
            |..|||..|:..|...:..|.|||||:...||..||.||     ||..:.|  ..|.||.||:||
 Frog   776 CGPAQSFAWSSCSEWSIGLRVPFVVDVCPMTFEQLDLLLRQVSEGMDGTSD--WPPPQEKECMAV 838

  Fly   947 ACLNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWS 1011
            |.|||.||||.|.|::..:|..:||..||.||.|||..::.||..:.||.|:|.|||..||.|||
 Frog   839 AMLNLLRLQLHAAISHQADPECLGLGLGSVLLNSLKQTVVTLASNAGVLNTVQSAAQAVLQSGWS 903

  Fly  1012 VLLPTAAERAQTLTSLLPSEPG---QASSAGHRFMTDLLVSSLMAEGGLESALQHAI-------- 1065
            ||||||.|||:.|::|||:...   ...|.|.|||.|||||||||:||||.||..||        
 Frog   904 VLLPTAEERARALSALLPNAASGNEMTISPGRRFMIDLLVSSLMADGGLECALNTAITAEIQDIE 968

  Fly  1066 -------------------RLESSSCSAD---CGDGVH-------LPLLQLITRLLSNNAALSQT 1101
                               .|..||...|   ...|::       |||:|||.:||.|.|  |||
 Frog   969 AKKEAQKEKEIDEQEANASSLHMSSTPLDKDLINAGIYESAGKQTLPLVQLIQQLLRNIA--SQT 1031

  Fly  1102 ---------RLSPTLGKQQEKEEEEREQQHQEPSTSPSLSLLHRFQRLLLSHIHQAQPEEETTGA 1157
                     |:|..|           ||:|.....|.|:.||.||||||:|.::.....::|...
 Frog  1032 IAKLKDMARRISSCL-----------EQEHYSKERSASMDLLLRFQRLLISKLYPGNDVDQTANT 1085

  Fly  1158 EALLLQYMHALIPACVATLQKAHELALQCREPGE------NSFGQMVGH---LGRVLQADISDAL 1213
                    ||.....|.:|.|.: :||.|...|:      |.....:.|   :.|::..|::..:
 Frog  1086 --------HAPEHLGVGSLLKKY-IALLCTHIGDILPVATNIASVSLRHFAEVSRIVAGDLTGVI 1141

  Fly  1214 LNELLVG--LLLLKRDRPQCLGGLRWAR-------LFLPLLRVLDRLNRALGEGELRDGDDMGWP 1269
            |.||:|.  |||.|.         .|..       |...||..||:.|......|..|.:|:.||
 Frog  1142 LPELVVSTVLLLCKN---------AWLMQESGAIPLLASLLEPLDKFNHLAPGKERDDNEDLAWP 1197

  Fly  1270 GIICRGGP--KGGPPPADPETHYVRRADMENLLLDGSRCIILAGYVCDLSGYNCESETLRSVLDS 1332
            ||:   |.  .|.....:.|...:|:||:||...||....::.|.|.|:..:..:|....::|..
 Frog  1198 GIL---GSFYNGQNSRNNEEVTLIRKADLENHNKDGGFWTVIDGKVYDIKDFQAQSLQANTILAH 1259

  Fly  1333 GLGKD----LTAEMSSQVHRTAMEHILEHHKLGKYMVQASTEEKSSAPGPSRLTH--FSSECALA 1391
            ..|:|    |.|.:..:..|.:|:...    :|.||  ...:|..:||..|.|:.  ..:|..|.
 Frog  1260 FAGEDPVVALEAALQFEDTRESMQAFC----VGHYM--EPDQEVIAAPDLSSLSSPLIDTERNLG 1318

  Fly  1392 QLLGLVANLMCSGPALQPAELQCRQLDKSSLLSGGLQLLQPSNPFDEEKGEARSSHSCHSTAGNT 1456
            .||||.|:.:.....|.|.|::|.:..:||:.|||||..|....::|||.|.. |:|..:||.|.
 Frog  1319 LLLGLHASYLSLSTPLAPVEVECAKWLRSSIFSGGLQTSQIHYSYNEEKDEDH-SNSPGNTASNK 1382

  Fly  1457 PTELPPPLPMQQQLAPGRGKSQLQLRADAFISGLAEARVSEPPVAAWLALTERYCKAHNLMWHQE 1521
            .......|.|.....|             |:..:|:....:..|..:|...:||||..:|.....
 Frog  1383 AKLYAHKLSMSDHSQP-------------FLQAIADNNTQDHNVKEFLCQIDRYCKQCHLTTPIT 1434

  Fly  1522 FATEHPVQELERLLSAVLIRHQYLGGLVLN-----ALETEVPP----PRQLGEIIRLVHQAKWSV 1577
            |..||||:|:.|||...|::|:.||.:.|:     ||..|...    |:.:.::.|:|:|||.|:
 Frog  1435 FPPEHPVEEVGRLLLCCLLKHEDLGNIALSLVHHGALSVEQVKHKTLPKSVVDVCRVVYQAKCSL 1499

  Fly  1578 VRTRQQLNRSYKEVCAPILERLRFLLYEVRPAISPQQRGLRRLPILQRPPRFKMLVRRLLQELRS 1642
            ::|.|:..|||||||||::||||||..|:|||:......:.:|.:|...||:|.:|:::::|.|.
 Frog  1500 IKTHQEQGRSYKEVCAPVIERLRFLFNELRPAVCNDLSIVSKLKLLSSVPRWKRIVQKIIREKRK 1564

  Fly  1643 SRQPAKPE--DLLNASIQQEQ---------EKKPQSMPKQEL---EEQEEEETLLRRLN------ 1687
            .:.|.|.|  |:.:..:..|:         ...|.|:.|:.:   ..:::.:.||..:.      
 Frog  1565 KKVPKKSESADVDDTKLGNEEGEMEESCVVPSSPVSVDKKTVPIKSPKDKWQPLLSTVAGVHKYK 1629

  Fly  1688 --ERQIHGEGELDPALMQDIVDFAL-QDSCDVETARRAMYCQMQRYQLRLAGLQIVQQLLELHGL 1749
              :..:.|... ..||:..||:|.| ::..|||..|:.:..|::|.::||.|:..:.:|.....|
 Frog  1630 WLKHNVQGTYP-QSALLGTIVEFVLKEEPVDVEKMRKCLLKQLERAEVRLEGIDTMLKLAAKTFL 1693

  Fly  1750 LDAAQYSLLNGFLGLHLKSTSSGGGSTGSGSSLHVLGQLNMISAYQKARLLLAQSRVLDWAVREL 1814
            |.:.||::..|:..|..:.|:.....|      ..|..:::|..:.:..|.:...::..|||:.:
 Frog  1694 LPSVQYAMFCGWQRLAPEGTNISEPLT------DCLKDVDLIPPFNRMLLEVTFGKLYAWAVQNI 1752

  Fly  1815 RR---------------------LVNQEQQGHARGKDSTNLGTYVLLKRLPRARFLLSVFGLLAK 1858
            |.                     :.|:...|       .:|||      :|:|||:|.:..:|..
 Frog  1753 RNTLMDASSCFKEMGIQPVPLQTITNENPSG-------PSLGT------IPQARFMLVMVNMLTC 1804

  Fly  1859 ELGPNELGFLINSGLLG---TVLGLLAQT--GGEGATGGQVHGELSILYEDSVLKQKSSKAQL-- 1916
            :.|...|..|:|||:|.   |:|.|:..:  ..|..:...|.|..:.:.|:|  :::::..||  
 Frog  1805 QHGAKSLNLLLNSGMLALTQTILRLIGPSCENSEDDSSVCVMGASATVLEES--RKETTPVQLPA 1867

  Fly  1917 SGPDLAKLMKIGTRIVRGADWKWGDQDGNPPGEGRIISEVGEDGWVRVEWYTGATNSYRMGKEGQ 1981
            |||:||.:||||||::||.|||||||||.|||.||:|.|:|||||:||:|.||:||||||||||:
 Frog  1868 SGPELAAMMKIGTRVMRGVDWKWGDQDGPPPGLGRVIGELGEDGWIRVQWDTGSTNSYRMGKEGK 1932

  Fly  1982 YDLQLADSALNVASPTEPEREDVSGSEASPTSDS----------HPSKLLRHCAAKLLQILAVGT 2036
            |||:|          |||.....:.:|.|.|.|.          ||:.|:......|||.|.:..
 Frog  1933 YDLKL----------TEPPPATQAMAEDSDTEDDSEGEQIDKNLHPTSLMLMSTVNLLQALCLSA 1987

  Fly  2037 GLHGAQLDKDALRGMTSMFRTII----YPKPS-MSN-ISYA---LGWLNLGFIRAISGDCPRLCL 2092
            |::...:..:..|.:..:.|.::    ..|.| .|| :.|.   ..|..|||||:|: ..|::|.
 Frog  1988 GVNAEVMQSETTRTLCGLLRMLVESGTMDKTSTQSNKLVYKEQHKSWCTLGFIRSIA-IMPQMCS 2051

  Fly  2093 ELSTPGWLSHYLSLLEQPAG-NEAGVYRQLHCLRLLQLILAQWGAEEEP-RMPALVHQLFATLGR 2155
            .||.|.|:|..:.::|.|.. :.|.:.||:..:||||.:|..|...|.. .|..||.:||:.||.
 Frog  2052 TLSMPQWISLLMKIVEGPESFSAASLQRQILAVRLLQAVLPSWDKNERSCDMKTLVEKLFSFLGS 2116

  Fly  2156 IALHCPGDASLLPTA-----EGKARVLLTASHSGSVAEELVALLRRLHTLPSWNPVINSFLAQKL 2215
            :...|..|..||..:     :.:.:..|||:||.::|||:|||||.||:|..||.:||.::..:|
 Frog  2117 LLSTCSSDIPLLRESTLRRRKARPQASLTATHSSTLAEEIVALLRTLHSLNQWNGLINKYINSQL 2181

  Fly  2216 CVAAELL-AEQSHSTAL-----DSEQVFV---LGVLGAMGGHDLRPRVGLHC----FHEGSHMVI 2267
            .....:. .::...|.|     |||...|   :.||..:||.|.|.|:|...    |.||:   :
 Frog  2182 NSVTNIFEGKRFDMTVLEDYFPDSEGPEVGSLMAVLAVIGGIDSRLRLGGQVVQDEFGEGT---V 2243

  Fly  2268 ASFTPKGRCLLAPGGVGSGVGFVKVQLPAVMP----H-LDHTVFSLSRLPMNEMLLNAWTVL--L 2325
            ...||||:..         |.|..|:...:.|    | :....|:::.||..:.:|:.|..|  |
 Frog  2244 TRITPKGKIT---------VQFHDVRTSRICPLNQLHPMPVVPFNVNNLPFTDSMLSVWAQLVNL 2299

  Fly  2326 YGPAPELRELPSS----ADGRLDLALLRAQQLQMAVLHTNGVLYRHQVALRRILKQ---RAPGSI 2383
            .|...|...|..|    ...::||..||.|||::.:|.....|..||..||:||.|   :.||.|
 Frog  2300 AGCKLEKHRLKKSMRQGLTDQVDLDRLRCQQLKLYILKAGRALLSHQDRLRQILSQPSVQEPGLI 2364

  Fly  2384 ------YASPDEPDRSDAESQQPGEQDQQLSSGSGQEPQLLIQCILLRATQASPVKACYSYMDLA 2442
                  .|||:..|.| .|..||              |.:|:|.:|..|||.|||||.:...:|.
 Frog  2365 ASDEGATASPEMVDMS-PEGPQP--------------PMILLQQLLTAATQPSPVKAIFDKQELE 2414

  Fly  2443 TAALNCIQSLATQA-HQELSEGGGVPPNGRALSSPPQPTMVHGVPVYNVARKEQKPSEQVEQKSK 2506
            .|||...|.||.:: |........:..:..| |||  .||.|..|. .|.:::|.|...|     
 Frog  2415 AAALAVCQFLAVESTHPSTPLFEDICSSSEA-SSP--VTMQHIRPA-KVKKRKQSPIPPV----- 2470

  Fly  2507 WPAAATDAQLIGQIMEMGFTRRTVELALKQL---SLQAEIMPTPEQIVQWILEHPDVCANTIEED 2568
                    .::.|:|||||.|:.:|.|||.|   |..|...|..|.:|.|:|:|||:        
 Frog  2471 --------PIVVQLMEMGFQRKNIEFALKSLSGASGTASSSPGVEALVGWLLDHPDI-------- 2519

  Fly  2569 TLPLASSASSHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGPAPPVK-FESRKDFQTADL 2632
              .:|..:.:.....|||.|.......|.:|        .|||........: ::.|.||.:.|.
 Frog  2520 --QIAELSDAETASEDSDEEIVEEVEETEAS--------YPMANGAVVTESQTYKKRADFLSNDD 2574

  Fly  2633 YALYVRGLVRPGMTVRCCRDFEEIKQGDMGTVLIVDTEGLHDLNVQVDWRNHGSTYWVCFVHIEL 2697
            ||:|||..|:.||.|||||.:||:.:||:|.|:.:|.:||:|||||.||:..|.||||.::|:||
 Frog  2575 YAVYVRENVQVGMMVRCCRTYEEVCEGDVGKVIKLDRDGLYDLNVQCDWQEKGGTYWVRYIHVEL 2639

  Fly  2698 VEAAQTHHQPRPPPIAVGARVRLRTSSLRYGMLCPLRLGRSQGSSAIGVVS--SVRSKQLTVDFP 2760
            :....   |..|..|.:|.:||::.|     :..|.....|....::|||.  |...|.:.||||
 Frog  2640 LGFPP---QSSPSHIKIGDKVRVKAS-----VTTPKYKWGSVTHRSVGVVKAFSANGKDVIVDFP 2696

  Fly  2761 DQPAWQGHINEVELVASQPTSATLPSLGDSCSQMP------------------------------ 2795
            .|..|.|.::|:|||.|.....|.    |.|...|                              
 Frog  2697 QQSHWTGLLSEMELVPSIHAGVTC----DGCQMFPIHGSRFKCRVCDDFDFCDTCFKNRKHNARH 2757

  Fly  2796 -------PSD----------------------LIEDWSRCIRSLTVSSNEAAAKHLLNGSNQPWQ 2831
                   |..                      |::||||.::||||||:...|..|::||:|.||
 Frog  2758 TFGRINEPGQSPVFCGRSGKQLKQRHSGQRGMLLDDWSRIVKSLTVSSSVNQASRLIDGSDQCWQ 2822

  Fly  2832 SCSSGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGASR 2896
            | |....:||||||:...:.||.|.:.|.|.|.|:||||:.:..|:.:::|.|...|.:......
 Frog  2823 S-SGSQGKHWIRLEIFPDVFVHRLVMTVDPADSSYMPSLVVVSGGNSLNNLIELKTININPTDLN 2886

  Fly  2897 VLLMQQVPTYYPWVEVVVKQCQNNGIQCKIHGIKFVGRRQQPDLQHILANAQFLASEY------S 2955
            |:|:.....|:.::|:.:|||:::||.||||.:..||:.:..|  ..:|...||||:.      .
 Frog  2887 VVLLTDCTEYHRYIEIAIKQCRSSGIDCKIHELNLVGQIRAED--EDMATVPFLASDNDEEDDDK 2949

  Fly  2956 AGVGP---GSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTIS 3017
            |..|.   ..|||..:.:|            :...|.|||||||:|||||||||:|||:||:|:|
 Frog  2950 ASTGSFVRKKTAGLESTAT------------IRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 3002

  Fly  3018 RLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTH-NVPLPHQLPVLRQYVVKKVAVHSG 3081
            .|..:.:||||||||.|:.:||||||||.||||||||::. .||:|.|:..|..|||||||||||
 Frog  3003 ALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3067

  Fly  3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 3146
            |:||.|||:||||||||||:||||||.:|...|||||:|||:.|:|||:||||||||||:|.|||
 Frog  3068 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3132

  Fly  3147 YTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3211
            |||||||||||||||||||||||:|..|.|.||:|||||||||||||||::|.||||||||||||
 Frog  3133 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3197

  Fly  3212 GRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP 3276
            |||||||.:.|..||||:|..|.|||||||||||||::|.|||||||||:|||||.|.||||||.
 Frog  3198 GRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3262

  Fly  3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVA 3341
            :.||||::::||||||||||||||||||||||||||||||:|.|.||:||.||.||:...:.|||
 Frog  3263 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVA 3327

  Fly  3342 CGSSHSIAWGLPNASSDEEKRGPVPFSSTRDPLGGSSLGI---YEAETMQTLK----QEAKPLNQ 3399
            ||||||:||...:.::..... ||.|.:.||.||.|.||:   .|:....:.|    ...|| |:
 Frog  3328 CGSSHSVAWTTVDVATPSVHE-PVLFQTARDALGASYLGVPSDSESSPSSSNKISGVSSLKP-NR 3390

  Fly  3400 SSLSE-SLALETPAARQAALGHVLRAMSILQARQLIVAALTSHSKVNFKERGAVGGEEDHLIGGP 3463
            .||:: .|:::...|:|.||.|:|.|:.|:.||..:|.||...|.:                 .|
 Frog  3391 PSLAKILLSIDGSLAKQQALSHILTALQIMYARDAVVGALMPASMI-----------------AP 3438

  Fly  3464 IMGAPLQLAETIAQGGGEAPADATDAGL-----QEHSPEAAVDALTGGMSGGANTLPPLSAGPLS 3523
            :....|..|......|..:|.:..|..|     ...||....|. .|.::...:.:.|.:..|  
 Frog  3439 MECPSLSTAPPSDMSGTSSPINGDDIMLAMDLEDRLSPSPWQDR-KGEVNSSEDAVTPSAVTP-- 3500

  Fly  3524 AFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISHCHG-----LDDFG 3583
                     |.|.:.|...:|...    ...|.|::|.|||:.:|.:...:...|     ||:|.
 Frog  3501 ---------SASAASSRPFIPVTD----DPGAASIIAETMTKTKEDVESQNKVTGPEPQCLDEFT 3552

  Fly  3584 GLLGEPEAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAAMLLETCITELEDLCTSR 3648
            .||...:.:.:|:||||||..|.|... .:.::..|..:|...|.||.||||.|:|||||:.|..
 Frog  3553 SLLVPDDTRVMVDLLKLAVSNRAGEKG-KEVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDS 3616

  Fly  3649 HCLGKL-PKPVMQESSHPYVDNVNVTGVVRIPGAEMLRLEFDSQCSTEKRNDPLVIMDGTGRVLA 3712
            .. |:| .:||:.||||||.|:.:.:|.|:|||||.||:|||.|||||:|:|||.||||..|:::
 Frog  3617 QS-GRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLTIMDGANRIVS 3680

  Fly  3713 MRSGREFAHWAPEIRVLGDELRWKFSSDSSVNGWGWRFWVHAIMPAATLGESGSDRAVLSQPSMA 3777
            :|||||::.|:.|:|:.||||:|||.||.|||||||||.|:.|||||...:..|||.:||.|||.
 Frog  3681 VRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVYPIMPAAGPKDLLSDRCILSCPSMD 3745

  Fly  3778 LVMSLLDSRL-APRQPSVLLRLASALAACSQLGALTTAQRIWSLRKLHAVLLLE----------- 3830
            ||..|||.|| .....|::.|||::||||:||.||....|:|:|::|..:|..|           
 Frog  3746 LVTCLLDFRLNFASNRSIVPRLAASLAACAQLSALAAGHRMWALQRLRKLLTTEFGQSININRLL 3810

  Fly  3831 -------QAPRPQDPSLSTLLQPLIPELLRQYEYEEPQVRGGIHLMHSDYFKTLAALACDMQLDA 3888
                   :|......:|:.|::.|...|.||:|||:|.||||..|:||.:||.|.|||||::|| 
 Frog  3811 GDGETETRAMSFSGSALAALVKGLPEALQRQFEYEDPIVRGGKQLLHSPFFKVLVALACDLELD- 3874

  Fly  3889 ALPATSSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRTELPRAFCLEVRKKFAEML 3953
            .||..:                :.||||||:|||:|.|||.:|.:||.|||.|..||.||..|::
 Frog  3875 TLPCCA----------------ETHKWAWFRRYCMASRVAVALDKRTPLPRQFLDEVAKKIRELM 3923

  Fly  3954 PSSSSNSNANPGCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQLESTSTLLHED 4018
               :.|.|.|.|                                                  ||.
 Frog  3924 ---ADNENMNAG--------------------------------------------------HES 3935

  Fly  4019 HTLFQAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLR 4083
            |..|:...|.||:||:|||||||.||.||:.|||||||||||||||:||:::|.|||||||:.||
 Frog  3936 HDTFKREQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR 4000

  Fly  4084 PVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC 4148
            ||||.||||:|||||.||||:|||||:|||||:||::|.:.||||.|:||||:||||||||||||
 Frog  4001 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4065

  Fly  4149 LALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213
            |||::|||||:|||.||||||||||...|||:::|.|.|..|.|||.|.||||.|||:|.:.|||
 Frog  4066 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWG 4130

  Fly  4214 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4278
            ||||||||||||||||:|||||||.|||.||||||||||||||:||||.||||||||||||||||
 Frog  4131 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4195

  Fly  4279 SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 4343
            |||||:|.||:||.|:||.|||||||||||||||||||||||||:|||||||.||||||::|..|
 Frog  4196 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4260

  Fly  4344 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408
            ||||:|:|||||||||.|::.||||||||||||||||||..||||||||||||||.|.:|.||||
 Frog  4261 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSA 4325

  Fly  4409 HTLALSTSQLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGDL--- 4470
            ||||.|||:.:...:.....|:||:.::::...||..||:||||.|||.|||:.|..:.|.|   
 Frog  4326 HTLAWSTSKPANAGKLPSQVPMEYNHLQEIMIIALRNRLLLLHHISELFCPCIPMFDLEGRLDES 4390

  Fly  4471 ----SLG--ALKDVLVYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGM 4529
                |:|  .|:.:|:...||||||||:|.|||||:|||||:|||||||||||:: .||||.||.
 Frog  4391 GQGPSIGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSK-GGLAGPDGT 4454

  Fly  4530 KSVFGQMVQKLPLLTQEALALPHRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTP 4594
            |||||||..|:...:.::|.||||||||||||||||||||||||||||||:|||||..||||.||
 Frog  4455 KSVFGQMCAKMASFSPDSLLLPHRVWKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTP 4519

  Fly  4595 NGRGEAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPT 4659
            |||.|:|||||||||:|...:.|.||||||||||:|||:|||||||:|||||||:||.|..|...
 Frog  4520 NGRDESGANRDCFLLNPAAKTTLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIA 4584

  Fly  4660 DLTEVDRDYVAGLLCIRNMDDDPKLFTALELPFSTSSARGHEVPLSTRYTHISPRNRAEYVRLAL 4724
            ||:|||:|::.||:.||:.:...:.|.|:.|||:..||.|.::.||:::|||:..|||||||||:
 Frog  4585 DLSEVDKDFIPGLMYIRDNEATSEEFEAMILPFTVPSASGQDIQLSSKHTHITLDNRAEYVRLAI 4649

  Fly  4725 GFRLHEFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSAL 4789
            |:|||||||||.|||:||::|:||||||||:..||:.||||||||||.||||||||||.:|:::|
 Frog  4650 GYRLHEFDEQVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPTASL 4714

  Fly  4790 VTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEK-NPPDHFLPESYTCFFL 4853
            :.|||:|||.|:|.||||||||||||||||||||||||||||:|||:| ||||||||||||||||
 Frog  4715 IQWFWDVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRDFVIQVLDKYNPPDHFLPESYTCFFL 4779

  Fly  4854 LKMPRYSCKAVLLEKLKYAIHFCKSIDTDEYARVAM-GEPT--EATGSEDNSDLESVAS 4909
            ||:||||||.||.||||||||||||||||:|||:|: |||.  :::...||.|.:|.||
 Frog  4780 LKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYARIALTGEPAADDSSDDSDNEDADSFAS 4838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HERC2NP_608388.2 RCC1 638..683 CDD:278826 21/48 (44%)
RCC1 687..737 CDD:278826 29/49 (59%)
RCC1 740..787 CDD:278826 24/48 (50%)
RCC1 790..841 CDD:278826 22/52 (42%)
RCC1_2 828..857 CDD:290274 18/28 (64%)
Cyt-b5 1290..1363 CDD:278597 19/76 (25%)
MIB_HERC2 1928..1987 CDD:284184 44/58 (76%)
UBA_HERC2 2515..2559 CDD:270585 20/46 (43%)
Cul7 2624..2699 CDD:288381 41/74 (55%)
APC10-HERC2 2762..2932 CDD:176485 67/228 (29%)
RCC1 3037..3088 CDD:278826 35/51 (69%)
RCC1 3091..3140 CDD:278826 37/48 (77%)
RCC1 3144..3194 CDD:278826 43/49 (88%)
RCC1 3197..3246 CDD:278826 37/48 (77%)
RCC1 3250..3298 CDD:278826 36/47 (77%)
RCC1 3302..3350 CDD:278826 34/47 (72%)
RCC1_2 4136..4166 CDD:290274 24/29 (83%)
RCC1 4154..4203 CDD:278826 33/48 (69%)
RCC1 4206..4257 CDD:278826 43/50 (86%)
RCC1 4260..4309 CDD:278826 41/48 (85%)
RCC1 4312..4360 CDD:278826 39/47 (83%)
RCC1 4364..4413 CDD:278826 41/48 (85%)
HECTc 4509..4880 CDD:238033 269/371 (73%)
HECTc 4553..4878 CDD:214523 240/325 (74%)
herc2XP_012813154.2 ATS1 <501..794 CDD:227511 130/298 (44%)
Cyt-b5 1219..1291 CDD:395121 19/75 (25%)
MIB_HERC2 1879..1939 CDD:399589 45/69 (65%)
UBA_HERC2 2471..2518 CDD:270585 20/46 (43%)
Cul7 2566..2643 CDD:402903 41/76 (54%)
SH3_15 2651..2708 CDD:408152 19/61 (31%)
ZZ_HERC2 2718..2762 CDD:239084 4/47 (9%)
APC10-HERC2 2777..2922 CDD:176485 54/145 (37%)
ATS1 2968..3334 CDD:227511 273/377 (72%)
ATS1 4037..4342 CDD:227511 238/304 (78%)
HECTc 4435..4806 CDD:238033 269/371 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 480 1.000 Domainoid score I415
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3430
Inparanoid 1 1.050 3483 1.000 Inparanoid score I12
OMA 1 1.010 - - QHG50139
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0007465
OrthoInspector 1 1.000 - - oto104152
Panther 1 1.100 - - LDO PTHR22870
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4599
SonicParanoid 1 1.000 - - X6340
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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