Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003197660.3 | Gene: | hecw2b / 100331355 | ZFINID: | ZDB-GENE-101001-3 | Length: | 1472 | Species: | Danio rerio |
Alignment Length: | 1974 | Identity: | 365/1974 - (18%) |
---|---|---|---|
Similarity: | 606/1974 - (30%) | Gaps: | 722/1974 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK----- 3167
Fly 3168 PKLVTALAGRRVVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE 3226
Fly 3227 RLSGIGVVQIE--CGAQF------SLALTRAGE-VWTWGKGDY---------YRLGHGGDQHVRK 3273
Fly 3274 PQPIGGLRGRRVIHVAVGALHCLAVTD-AGQVYAWGDNDHGQQG-SGNTFVNKKPALVIGLDAVF 3336
Fly 3337 VNRVACGSSHSIAWGLPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSS 3401
Fly 3402 LSESLALETPAARQAALGHVLRAMSILQAR-----QLIVAAL-----TSH--SKVNFKERGAVGG 3454
Fly 3455 EEDHLIGGPIMGAPLQLAETIAQGGGEAPADATDAGLQEHSPEAAVDALTGGMSGGANTLPPLS- 3518
Fly 3519 --AGPLSAFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEML----------- 3570
Fly 3571 --SHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAA-- 3631
Fly 3632 -------MLLETCITELEDLCTSRH--CLGKLPKPVMQESSHPYVDNVNVTGVVRIPGAEMLRLE 3687
Fly 3688 FDSQCSTEKRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRVLGDELRWKFSSDSSVNGWGWRFWV 3752
Fly 3753 HAIMPAATLGESGSDRAVLS-----------QPSMAL-----VMSLLDSRL--APRQPSVLLRLA 3799
Fly 3800 SALAACSQLGALTTA------------------QRIWSLRK----------LHAVLLLEQAPRPQ 3836
Fly 3837 DPSLSTLL--------------QPL--IP----ELLRQYEYEEP-----QVRGGIH--LMHSDYF 3874
Fly 3875 KTLAALACDMQLDAALPATSSSSSSSAAPGAISSTGDVHKWAWF-KRYCIAVRVAQSLIR----- 3933
Fly 3934 RTELPRAFCLEVRKKFAEMLPSSSSNSN---------ANPGCQSPGASMLNSTTSLSSSTVSNVS 3989
Fly 3990 PPPGITGEQPDLHCH--AHQLESTSTLL--------HEDHTLFQAPHDAQLLQWLNR-------R 4037
Fly 4038 PDDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGK 4102
Fly 4103 LFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167
Fly 4168 LGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGHGDSEDQL 4229
Fly 4230 RPKLVEALLGYRAIDIACGSGDAQTLCITD--DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA 4292
Fly 4293 GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4357
Fly 4358 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERL 4422
Fly 4423 RPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGDLSLGALKDVLVYNIKEAA 4487
Fly 4488 FRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPH 4552
Fly 4553 RVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVL 4617
Fly 4618 QMN---MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLR-PTDLTE---VDRDYVAGLLCI 4675
Fly 4676 RNMDDDPKL---FTALELPFSTSSAR-----GHEVPLSTRYTHISPRNRAEYVRLALGFRLHE-F 4731
Fly 4732 DEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYK-GFDPSSALVTWFWE 4795
Fly 4796 VMEEFTNQERSLFLRFVWGRTRLP-RTIADFRGRDFVLQVLEKNPPDHF----------LPESYT 4849
Fly 4850 CFFLLKMPRYSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | 7/31 (23%) | ||
RCC1 | 3144..3194 | CDD:278826 | 12/54 (22%) | ||
RCC1 | 3197..3246 | CDD:278826 | 10/56 (18%) | ||
RCC1 | 3250..3298 | CDD:278826 | 12/57 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 8/48 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 5/29 (17%) | ||
RCC1 | 4154..4203 | CDD:278826 | 11/48 (23%) | ||
RCC1 | 4206..4257 | CDD:278826 | 12/50 (24%) | ||
RCC1 | 4260..4309 | CDD:278826 | 3/48 (6%) | ||
RCC1 | 4312..4360 | CDD:278826 | 5/47 (11%) | ||
RCC1 | 4364..4413 | CDD:278826 | 5/48 (10%) | ||
HECTc | 4509..4880 | CDD:238033 | 97/393 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 93/349 (27%) | ||
hecw2b | XP_003197660.3 | HECW_N | 58..177 | CDD:318711 | 26/145 (18%) |
C2_NEDL1-like | 198..334 | CDD:176073 | 30/156 (19%) | ||
LGT | <491..633 | CDD:320995 | 32/194 (16%) | ||
WW | 708..737 | CDD:306827 | 4/42 (10%) | ||
WW | 887..919 | CDD:197736 | 8/55 (15%) | ||
HECTc | 1117..1470 | CDD:238033 | 97/390 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |