Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009302976.1 | Gene: | hecw2a / 100150269 | ZFINID: | ZDB-GENE-090311-22 | Length: | 1475 | Species: | Danio rerio |
Alignment Length: | 2096 | Identity: | 389/2096 - (18%) |
---|---|---|---|
Similarity: | 625/2096 - (29%) | Gaps: | 800/2096 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 2933 GRRQQPDLQHILA--NAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLND 2995
Fly 2996 KEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSK---------SLFIVSQ--DGKVYAC-GEGTN 3048
Fly 3049 G--------RLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3105
Fly 3106 GHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKL 3170
Fly 3171 VT-ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP----HEIERLSG 3230
Fly 3231 IGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-----------------RKPQPIG 3278
Fly 3279 GLRGRRVIHVAVGALHCLAVTDAGQVYAWGD------------NDH--GQQGSGNTFVNKKPALV 3329
Fly 3330 IGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRGPVPFSSTRDPLGGSSLG-------------- 3380
Fly 3381 --IYEAETMQTLKQEA---KPLNQSSLSESL-ALETP-AARQAALGHVLRAMSILQARQLIVAAL 3438
Fly 3439 TSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQLAETIAQGGGEAPADAT-----DAGLQEHSPEA 3498
Fly 3499 AVDALTGGMSGGANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATM 3563
Fly 3564 TQQEEMLSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPPSTSQTI---ADTLISLGA- 3624
Fly 3625 -------GTPAVAAMLLETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTGVVRIPGAE 3682
Fly 3683 MLRLEFDSQCSTEKRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRVLGDELRWKFSSDSSVNGWG 3747
Fly 3748 WRFWVHAIMPAATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVLLRLAS--ALAACSQLGA 3810
Fly 3811 LTTAQRIWSLRKLHAVLLLEQAPRPQD-PSLSTLLQPLIPELLRQYEYEEPQVRGGIHLMHSDYF 3874
Fly 3875 KTLAALACDMQLDAALPATSSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRTELPR 3939
Fly 3940 AFCLEVRKKFAEMLPSSSSNSNANPGCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPD---- 4000
Fly 4001 LHCH--AHQLESTSTLLHEDHTLFQAPHDAQ----------LLQWLN-------RRPDDWALSWG 4046
Fly 4047 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4111
Fly 4112 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY 4176
Fly 4177 DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR 4241
Fly 4242 AIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG--SDGCKLPYKIESLAGLGVVKVECGSQ 4304
Fly 4305 FSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYT 4369
Fly 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDL 4434
Fly 4435 VRDLAPEALHARLILLH---HFSELVCP------CLAMLPISGDLSLGALKDVLVYNIKEAAFRK 4490
Fly 4491 VIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRVW 4555
Fly 4556 KVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVLQMN 4620
Fly 4621 ---MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLR-PTDLTE---VDRDYVAGLLCIRNM 4678
Fly 4679 DDDPKL---FTALELPFSTSSARGHEVPLSTRYTHISPRNRAEYVRLALGFRLHE-FDEQVKAVR 4739
Fly 4740 DGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYK-GFDPSSALVTWFWEVMEEFTNQ 4803
Fly 4804 ERSLFLRFVWGRTRLP-RTIADFRGRDFVLQVLEKNPPDHF----------LPESYTCFFLLKMP 4857
Fly 4858 RYSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 14/59 (24%) | ||
RCC1 | 3091..3140 | CDD:278826 | 4/48 (8%) | ||
RCC1 | 3144..3194 | CDD:278826 | 9/50 (18%) | ||
RCC1 | 3197..3246 | CDD:278826 | 11/52 (21%) | ||
RCC1 | 3250..3298 | CDD:278826 | 11/64 (17%) | ||
RCC1 | 3302..3350 | CDD:278826 | 9/61 (15%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 0/29 (0%) | ||
RCC1 | 4154..4203 | CDD:278826 | 8/48 (17%) | ||
RCC1 | 4206..4257 | CDD:278826 | 5/50 (10%) | ||
RCC1 | 4260..4309 | CDD:278826 | 6/50 (12%) | ||
RCC1 | 4312..4360 | CDD:278826 | 6/47 (13%) | ||
RCC1 | 4364..4413 | CDD:278826 | 5/48 (10%) | ||
HECTc | 4509..4880 | CDD:238033 | 96/388 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 92/344 (27%) | ||
hecw2a | XP_009302976.1 | HECW_N | 50..169 | CDD:318711 | 25/187 (13%) |
C2_NEDL1-like | 188..323 | CDD:176073 | 32/189 (17%) | ||
WW | 724..756 | CDD:197736 | 8/31 (26%) | ||
WW | 903..934 | CDD:197736 | 8/76 (11%) | ||
HECTc | 1120..1473 | CDD:238033 | 96/385 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |