Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001184011.1 | Gene: | Rcc1 / 100088 | MGIID: | 1913989 | Length: | 434 | Species: | Mus musculus |
Alignment Length: | 433 | Identity: | 117/433 - (27%) |
---|---|---|---|
Similarity: | 184/433 - (42%) | Gaps: | 65/433 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 2914 VKQCQNNGIQCKIHGIKFVGRRQQPDLQHILANAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAA 2978
Fly 2979 AP-EQDL----------PC-----TVMVWGLNDKEQLG---GLKGSKVKVPTFSQTISRLRPIHI 3024
Fly 3025 AGGSKSLFIVSQDGKVYACG--EGTNGRLGLGVTHNVPLPHQL-PVLRQYVVKKVAVHSGGKHAL 3086
Fly 3087 ALTLDGKVFSWGEGEDGKLG--------HGNRTTLDK---PRLVEALRAK------KIRDVACGS 3134
Fly 3135 SHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 3199
Fly 3200 VFSWGDGDFGKLGRG-GSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 3263
Fly 3264 GHGGDQHVRKPQPIGG--LRGRRVIHVAVGALH-CLAVTDAGQ 3303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | 4/17 (24%) | ||
RCC1 | 3037..3088 | CDD:278826 | 17/53 (32%) | ||
RCC1 | 3091..3140 | CDD:278826 | 18/65 (28%) | ||
RCC1 | 3144..3194 | CDD:278826 | 11/49 (22%) | ||
RCC1 | 3197..3246 | CDD:278826 | 16/49 (33%) | ||
RCC1 | 3250..3298 | CDD:278826 | 19/50 (38%) | ||
RCC1 | 3302..3350 | CDD:278826 | 1/2 (50%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Rcc1 | NP_001184011.1 | RCC1 | 48..95 | CDD:278826 | 10/58 (17%) |
RCC1 | 98..147 | CDD:278826 | 11/51 (22%) | ||
RCC1 | 150..200 | CDD:278826 | 17/53 (32%) | ||
RCC1_2 | 187..216 | CDD:290274 | 12/28 (43%) | ||
RCC1 | 203..268 | CDD:278826 | 18/65 (28%) | ||
RCC1 | 271..322 | CDD:278826 | 11/50 (22%) | ||
RCC1 | 325..368 | CDD:278826 | 15/44 (34%) | ||
RCC1 | 376..427 | CDD:278826 | 18/50 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |