DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx16 and Stx16

DIOPT Version :9

Sequence 1:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_006235755.1 Gene:Stx16 / 362283 RGDID:1309423 Length:326 Species:Rattus norvegicus


Alignment Length:371 Identity:142/371 - (38%)
Similarity:198/371 - (53%) Gaps:67/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSRNLTEVFVIMRNNASKNRNHYDDRRGSDAERLLKHSVREAEEGLELQDD------------- 52
            |.:|.||:.|:::|||:.:||....::..|.......||...|.|..||.||             
  Rat     1 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHTTSSPLHSRSIAAELDELADDRMALVSGISLDPE 65

  Fly    53 ------YGTPPAWLDKFEEAQYTMSKIKPKLDELGSLHARHLLRPAFDDQRDDECDIEVLSQIVS 111
                  ..:||.|:|..:|.||.:.:||.|:.||.|||.:||.||..||..::|..||:.:|.|:
  Rat    66 AAIGVTKRSPPKWVDGVDEIQYDVGRIKQKMRELASLHDKHLNRPTLDDSSEEEHAIEITTQEVT 130

  Fly   112 KLITSTHRHIQCVRS-SIGVGSKMEQCLTVNAVHCALLQLQELTVKFRASQNAYLLQLNSREERS 175
            :|.....|.:|.:.| :....|:.|:.|..|.|......||||:..||.:|:.||.::.:|||||
  Rat   131 QLFHRCQRAVQALPSRARRTCSEQEERLLRNVVASLAQALQELSTSFRHAQSDYLKRMKNREERS 195

  Fly   176 QKYFDDGGGAGAGDVFTNVELGEQSAENFVDSFDNFLQPPAEGKSGNGYLFEDDEQAIDDHFQRP 240
            |.:||           |.|.|.:       |..|..|.       |.|  |.||:          
  Rat   196 QHFFD-----------TPVPLMD-------DGDDATLY-------GQG--FTDDQ---------- 223

  Fly   241 PASRMTQQQLLLFEEENTRVAQHREQEVTKIVKSIYDLNDIFKDLGHMVQEQGTVLDRIDYNVEQ 305
                      |:..|:||.|.:.||:|:.:||:||.|||:||:|||.|:.|||||||||||||||
  Rat   224 ----------LVLVEQNTLVVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQ 278

  Fly   306 TQTRVSEGLRQLHKAEMYQRKNRKMCVILVLAAVTFFMLLLLILTK 351
            :..:..:||:||||||.||:|||||.|||:|.||...::::||..|
  Rat   279 SCVKTEDGLKQLHKAEQYQKKNRKMLVILILVAVIVVLIVVLIAVK 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 35/57 (61%)
Stx16XP_006235755.1 SynN 80..>194 CDD:294095 43/113 (38%)
SNARE_syntaxin16 234..292 CDD:277198 35/57 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339923
Domainoid 1 1.000 113 1.000 Domainoid score I6029
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2791
Inparanoid 1 1.050 208 1.000 Inparanoid score I3622
OMA 1 1.010 - - QHG53593
OrthoDB 1 1.010 - - D1182451at2759
OrthoFinder 1 1.000 - - FOG0003413
OrthoInspector 1 1.000 - - oto97635
orthoMCL 1 0.900 - - OOG6_101604
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2307
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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