DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx16 and tlg2

DIOPT Version :9

Sequence 1:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_593832.1 Gene:tlg2 / 2543436 PomBaseID:SPAC823.05c Length:301 Species:Schizosaccharomyces pombe


Alignment Length:360 Identity:84/360 - (23%)
Similarity:157/360 - (43%) Gaps:73/360 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSRNLTEVFVIMRNNASKNRNHYDDR---RGSDAE---RLLKHSVREAEEGLELQDDYGTPPAW 59
            |..|:.|.:::..|.:.|    |:..|   .|.|.:   :.|.|  ::.::...::.|. ..|.|
pombe     1 MAYRDRTGLYITFRQSYS----HHGQRLELSGWDPKEERQSLVH--KDNKDNTVIEMDM-LAPRW 58

  Fly    60 LDKFEEAQYTMSKIKPKLDELGSLHARHLLRPAFDDQRDDECDIEVLSQIVSKLITSTHRHIQCV 124
            :....|....:...:..::.|...:|:|:| |:|.|:.:.|.:|:.|:..:::......:.:|..
pombe    59 VTVEGEIDSLLLNTRRNINLLDKQYAKHVL-PSFSDKTEQENEIQRLTIQITQDFQRCQKLLQVT 122

  Fly   125 RSSIGVGSKMEQCLTVNAVHCALLQLQELTVKFRASQNAYLLQLNSREERSQKYFDDGGGAGAGD 189
            ::.....:..|..:..|.:.....::|..:.:||..|:.||.:|.              |..|  
pombe   123 KAQTNSATGSEALMAKNFLSNLASRIQTESAQFRKKQSTYLKKLR--------------GLNA-- 171

  Fly   190 VFTNVELGEQSAENFVDSFDNFLQPPAEGKSGNGYLFEDDEQAIDDHFQRPPASRMTQQQLLLFE 254
               |:.                   |.|.|             :|:.......|:.|.||:.|.|
pombe   172 ---NIS-------------------PVESK-------------LDETVSDVAISQSTIQQVALME 201

  Fly   255 E--ENTRVAQHREQEVTKIVKSIYDLNDIFKDLGHMVQEQGTVLDRIDYNVEQTQTRVSEGLRQL 317
            |  |:.:..:| |:.|.||.:.|.:|..:|:||..:|.|||.::||||:|:||||.......::|
pombe   202 EQGEDEQAIRH-ERAVAKIAEGIIELAQMFQDLQVLVIEQGALVDRIDFNIEQTQVHAKSAEKEL 265

  Fly   318 HKAEMYQRKN---RKMC--VILVLAAVTFFMLLLL 347
            .|||.:|:..   |.:|  ::|::|.:....:.||
pombe   266 IKAESHQKNTGRLRFICFLILLIVALIVILAIKLL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 24/57 (42%)
tlg2NP_593832.1 COG5325 24..301 CDD:227635 77/333 (23%)
SNARE_syntaxin16 209..267 CDD:277198 24/58 (41%)
SNARE 243..293 CDD:283412 18/49 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I3635
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2791
Inparanoid 1 1.050 79 1.000 Inparanoid score I1860
OMA 1 1.010 - - QHG53593
OrthoFinder 1 1.000 - - FOG0003413
OrthoInspector 1 1.000 - - oto101540
orthoMCL 1 0.900 - - OOG6_101604
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3589
SonicParanoid 1 1.000 - - X2307
TreeFam 1 0.960 - -
1413.860

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