DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx16 and pep12

DIOPT Version :9

Sequence 1:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_595100.2 Gene:pep12 / 2540289 PomBaseID:SPBC31E1.04 Length:263 Species:Schizosaccharomyces pombe


Alignment Length:273 Identity:62/273 - (22%)
Similarity:110/273 - (40%) Gaps:68/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LITSTHRHIQCVR-SSIGVGSKMEQCLTVNAVHCALLQLQELTVKFRASQ--------------- 161
            |.:|..:.|..:| ::..:...:...||.| :|..|.|.:||:.|.|:..               
pombe    22 LASSIAQEIHALRGNTAAIHRYLVNNLTKN-LHEVLEQSRELSQKVRSDLVRLANIKDTKYGEEA 85

  Fly   162 ------------NAYLLQLNSREERSQKYFDDGGGAGAGDVFTNVELGEQSAENFVDSFDNFLQP 214
                        |..|.:|...:::..:...|  ...|.....|.::|:                
pombe    86 SSFALSKLTRDFNTVLAELQRVQQKCAQQESD--SVAAAQAALNQDVGQ---------------- 132

  Fly   215 PAEGKSGNGYLFEDDEQAI----DDHFQRPP--ASRMTQQQLLLFEEENTRVAQHREQEVTKIVK 273
                     :..|::|:.:    :...||.|  .|:::..||    |...|:...|:.|:..:.:
pombe   133 ---------HFIEEEERNVSLSNNSSGQRQPLTESKISNSQL----EYQQRLINERQGEIENLTQ 184

  Fly   274 SIYDLNDIFKDLGHMVQEQGTVLDRIDYNVEQTQTRVSEGLRQLHKAEMYQRKNRK--MCVILVL 336
            .|.:||:||:||..::.|||.::..|:|||..|.|......|||..|..:.||.||  .|.:::|
pombe   185 GINELNEIFRDLSTIINEQGELVTNIEYNVGNTSTNTKNASRQLQIANEHSRKARKRSFCFLVIL 249

  Fly   337 AAVTFFMLLLLIL 349
            ..:...:|..||:
pombe   250 VVILGVILTALIM 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 21/57 (37%)
pep12NP_595100.2 COG5325 1..261 CDD:227635 60/270 (22%)
SynN 14..116 CDD:294095 17/94 (18%)
SNARE_Qa 172..229 CDD:277193 20/56 (36%)
SNARE 205..256 CDD:283412 16/50 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3589
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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