DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx16 and syx-16

DIOPT Version :9

Sequence 1:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001379771.1 Gene:syx-16 / 175712 WormBaseID:WBGene00022534 Length:329 Species:Caenorhabditis elegans


Alignment Length:361 Identity:109/361 - (30%)
Similarity:184/361 - (50%) Gaps:62/361 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TSRNLTEVFVIMRNNASKNRNHYDD------RRGSDAERLLKHSVREAEEGLELQDDYGTPPAWL 60
            |:|||||||:::|:||.::|..|.|      |...|.||:   ::.|.|:|.:..|:   .|.|:
 Worm    21 TTRNLTEVFMLLRSNAHQSRLIYKDDTDIIVRSRGDEERM---ALVELEDGRQESDE---EPVWI 79

  Fly    61 DKFEEAQYTMSKIKPKLDELGSLHARHLLRPAFDDQ--RDDECDIEVLSQIVSKLITSTHRHIQC 123
            ...::.::.:.:::.:|||||....:|:.||.|.|:  ..:|..:|..::.:::::|...|.|:.
 Worm    80 HTADQVEFEVERVQRRLDELGEAQRKHISRPNFGDEAFEKEEKQMEQTTEQITQMLTHCQRLIRM 144

  Fly   124 VRSSIGVGSKMEQCLTVNAVHCALLQLQELTVKFRASQNAYLLQLNSREERSQKYFDDGGGAGAG 188
            :..|......|::.|..||.....|.|.::|.:||..|..||..:.:|                 
 Worm   145 ISGSHNKEKPMQRKLRENAAATLSLTLSQITDEFRGRQLKYLSDIQNR----------------- 192

  Fly   189 DVFTNVELGEQSAENFVDSFDNFLQPP--AEGKSGNGYLFEDDEQAIDDHFQRPPASRMTQQQLL 251
                     .::.:|::.:.|..:..|  ||                   ....|::.::..||.
 Worm   193 ---------SRNVDNYLITTDPLIDAPNWAE-------------------LDVSPSTEISMAQLQ 229

  Fly   252 LFEEENTRVAQHREQEVTKIVKSIYDLNDIFKDLGHMVQEQGTVLDRIDYNVEQTQTRVSEGLRQ 316
            .| ..|.|..:.||:||..:..||.:||.:|:||..|:.:||:|:||||||||||..|||:.:..
 Worm   230 QF-MNNDREVREREKEVMAVNTSIRELNTLFQDLSEMIVDQGSVIDRIDYNVEQTSIRVSKAVED 293

  Fly   317 LHKAEMYQRKNRKMCVILVLAAVTFFMLLLLILTKL 352
            :.|||.||:.|:||..|.:|.....|:|:|:|:|||
 Worm   294 VFKAERYQKGNKKMHCICMLTVAIIFVLILIIVTKL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 28/57 (49%)
syx-16NP_001379771.1 COG5325 69..316 CDD:227635 81/295 (27%)
SNARE_syntaxin16 238..296 CDD:277198 28/57 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158855
Domainoid 1 1.000 102 1.000 Domainoid score I4322
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2791
Inparanoid 1 1.050 163 1.000 Inparanoid score I2833
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53593
OrthoDB 1 1.010 - - D1182451at2759
OrthoFinder 1 1.000 - - FOG0003413
OrthoInspector 1 1.000 - - oto18726
orthoMCL 1 0.900 - - OOG6_101604
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3589
SonicParanoid 1 1.000 - - X2307
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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