DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0004 and Pno1

DIOPT Version :9

Sequence 1:NP_608387.1 Gene:l(1)G0004 / 33033 FlyBaseID:FBgn0027334 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_954514.2 Gene:Pno1 / 289809 RGDID:727882 Length:251 Species:Rattus norvegicus


Alignment Length:254 Identity:145/254 - (57%)
Similarity:185/254 - (72%) Gaps:22/254 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAENI-RADAFEP-----AKRATKRGA--SGGGQQDVE---MQVDEATGIEGQVLGSSRASAPP 54
            ||.:|. ..|.|.|     .:||.||.|  |....||.:   |..:||.       .:.|...||
  Rat     4 METQNTGTEDGFTPVTHRGGRRAKKRQAEQSSAAGQDGDAGRMDTEEAR-------PAKRPVFPP 61

  Fly    55 ----KAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDI 115
                :....:.|.||:.||.:||:.|||:|||||||:|||:.||||||:|:|.||:|...:|.|:
  Rat    62 LSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDV 126

  Fly   116 ANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAGKGGRTKF 180
            :.|.:.||||:||:.||:|:|||||:||:|||:|||||.|||.|:|||.||||||:|||||:|||
  Rat   127 SALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKF 191

  Fly   181 TIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSER 239
            ||||||:|||||||.|:|||||:|||::||.|:||||||:||||||||:||||||.::|
  Rat   192 TIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0004NP_608387.1 Krr1 61..239 CDD:224019 124/177 (70%)
KH 165..217 CDD:197652 41/51 (80%)
Pno1NP_954514.2 Krr1 71..246 CDD:224019 122/174 (70%)
KH 176..228 CDD:197652 41/51 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340784
Domainoid 1 1.000 267 1.000 Domainoid score I1792
eggNOG 1 0.900 - - E1_COG1094
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6961
Inparanoid 1 1.050 268 1.000 Inparanoid score I2952
OMA 1 1.010 - - QHG53604
OrthoDB 1 1.010 - - D1269649at2759
OrthoFinder 1 1.000 - - FOG0005076
OrthoInspector 1 1.000 - - oto96656
orthoMCL 1 0.900 - - OOG6_101323
Panther 1 1.100 - - LDO PTHR12826
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3599
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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