DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0004 and pno-1

DIOPT Version :9

Sequence 1:NP_608387.1 Gene:l(1)G0004 / 33033 FlyBaseID:FBgn0027334 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_496099.1 Gene:pno-1 / 174534 WormBaseID:WBGene00013144 Length:277 Species:Caenorhabditis elegans


Alignment Length:239 Identity:130/239 - (54%)
Similarity:175/239 - (73%) Gaps:10/239 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RADAFEPAKRATKRG-ASGGGQQDVEMQVDEATGIEGQVLGSSRASAPPKAKR---ARSELRKVS 67
            :.|.|:..||..|.| |.....:||. ||||    :.....:..::.|..:||   .:.|.|.|.
 Worm    44 KGDEFKLVKRKRKSGNAIDVVMEDVS-QVDE----DATADTADDSTGPKSSKRTKGVKGESRVVP 103

  Fly    68 VPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQRGADFVRAFLCGF 132
            ||.|||:.||::|:.||||:|:::.||:|||:|.||||:|...:..|..:||:..||||||:.||
 Worm   104 VPKHRYTPLKDNWVNIFTPIVKNLGLQVRFNLKKRQVEIRNPVDREDTTDLQKATDFVRAFILGF 168

  Fly   133 EVDDALALLRLEDLFVESFEIKDVK-TLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSK 196
            ||:||:||:||:.||:|:||:.||| :|:|||.||||||:|||.||||..|||.||||||:|::|
 Worm   169 EVNDAIALIRLDHLFLETFEVADVKHSLKGDHVSRAIGRIAGKDGRTKLVIENTTKTRIVVANTK 233

  Fly   197 IHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSERM 240
            |||||:|||::|||.|||:|||||.||||||:||.:|||.:||:
 Worm   234 IHILGAYQNLKLARNAVCSLILGSNPSKVYGSLRNMASRGAERL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0004NP_608387.1 Krr1 61..239 CDD:224019 112/178 (63%)
KH 165..217 CDD:197652 38/51 (75%)
pno-1NP_496099.1 Krr1 98..276 CDD:224019 112/177 (63%)
KH 202..254 CDD:197652 38/51 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159292
Domainoid 1 1.000 240 1.000 Domainoid score I1257
eggNOG 1 0.900 - - E1_COG1094
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6961
Inparanoid 1 1.050 241 1.000 Inparanoid score I2098
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53604
OrthoDB 1 1.010 - - D1269649at2759
OrthoFinder 1 1.000 - - FOG0005076
OrthoInspector 1 1.000 - - oto17998
orthoMCL 1 0.900 - - OOG6_101323
Panther 1 1.100 - - LDO PTHR12826
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R943
SonicParanoid 1 1.000 - - X3599
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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