DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and AT5G46520

DIOPT Version :9

Sequence 1:NP_001259742.1 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001330914.1 Gene:AT5G46520 / 834695 AraportID:AT5G46520 Length:1206 Species:Arabidopsis thaliana


Alignment Length:447 Identity:93/447 - (20%)
Similarity:169/447 - (37%) Gaps:124/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CPAECICLSQTQVLCNTGGLEQIPLRQLPATVE------NLALTKNNFP------IIKPDSFAGL 82
            |.:..|.::..:......|::.|....||:...      ..|..:|:.|      :::....||.
plant   358 CGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEGFEELVVEIAWLAGS 422

  Fly    83 RALKKLSLDGNNIT-RIKQFAFRGLPRLKE---------LSIQYTPLQMVAQFAFAGLQNLSTIL 137
            ..| .|::.|:.:. |.|::..:.||||:.         |.:.|..:..|...|   |..|...|
plant   423 LPL-GLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAIGNVKDQA---LFRLIACL 483

  Fly   138 LSHNQIQRIEGNAFAGTSNIKLILLTNNPL---IRIDSSAFSSLTNVGH-------LILPSG--- 189
            .:|.:::.||            :||.::.|   |.:::....||.:|.:       |:..:|   
plant   484 FNHVKVRDIE------------LLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLLQETGRNI 536

  Fly   190 IRSIEQD-----AFF------------GMDTVGLLKLAYMDLKEVAPF-----TFRGLSNVLLL- 231
            :||...|     .|.            |:.|..:|.:: :|..:|:.|     .|:|:.|:|.| 
plant   537 VRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGIS-LDTSKVSEFCVHENAFKGMGNLLFLD 600

  Fly   232 ----TLQESDLGV---------------ICADAF-------TGLTQVETLQILNNKIDSIEE--L 268
                |..|.::.|               :..|.|       |.|..:..|::.::|::.:.|  :
plant   601 ISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTFLRNLVKLEMHDSKLEKLWEGAM 665

  Fly   269 NFTSTAAIKHLKFFGNHVL-ETPDPNSIIVDGVEHLQLVSNHFPCGCHIHTLLDGPLAEGAHNLT 332
            :||   .:|.|..:.:..| |.||.:.  ...:|.|..        .|..:|::  |.....||.
plant   666 SFT---CLKELDMWASKYLKEIPDLSK--ATNIEKLDF--------GHCWSLVE--LPSSIRNLN 715

  Fly   333 DFLQKN--YCISPLEV--NGRVMSELDIDSIGRCSDQLTKGNLGSSAASLALGINSM 385
            ..|:.|  || ..||.  .|..:..||..:...|....|.....::.::|.|...|:
plant   716 KLLELNMEYC-GELETLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAETSI 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_001259742.1 leucine-rich repeat 61..84 CDD:275380 5/34 (15%)
LRR_5 73..200 CDD:404228 34/166 (20%)
leucine-rich repeat 85..108 CDD:275380 6/23 (26%)
leucine-rich repeat 109..132 CDD:275380 6/31 (19%)
leucine-rich repeat 133..156 CDD:275380 5/22 (23%)
leucine-rich repeat 157..180 CDD:275380 6/25 (24%)
leucine-rich repeat 181..203 CDD:275380 8/48 (17%)
leucine-rich repeat 204..227 CDD:275380 6/27 (22%)
leucine-rich repeat 228..251 CDD:275380 9/49 (18%)
leucine-rich repeat 252..275 CDD:275380 5/24 (21%)
AT5G46520NP_001330914.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282791at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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