DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and Cpn2

DIOPT Version :10

Sequence 1:NP_608382.2 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_082180.2 Gene:Cpn2 / 71756 MGIID:1919006 Length:547 Species:Mus musculus


Alignment Length:519 Identity:95/519 - (18%)
Similarity:183/519 - (35%) Gaps:138/519 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SWLVLIIALSVVVCLWNSQQTETSKSCPAECICLSQTQVLCNTGGLEQIPLRQLPATVENLALTK 68
            :||..:..|.:         ...::.||..|.|..: :|.|:...|..|| ..:|..:.::...:
Mouse     5 AWLCWVSLLLL---------ARLTQPCPVGCDCFGR-EVFCSDEQLADIP-PDIPPHITDIVFVE 58

  Fly    69 NNFPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFA----- 128
            ..|..::..:|:|...|.|:......:..::..||.|||||::|.|..:|:..::...|:     
Mouse    59 TAFTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSL 123

  Fly   129 -------------------------------------------GLQNLSTILLSHNQIQRIEGNA 150
                                                       .|::|.|:.|:.|.:.::...|
Mouse   124 EKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 188

  Fly   151 FAGTSNIKLILLTNNPLIRIDSSAFSSLTNVGHLIL----------------------------- 186
            |...:.::::.|:||.|.|:...|..||:::..|.|                             
Mouse   189 FQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAI 253

  Fly   187 --------------------PSGIRSIEQDAFFGMDTVGLLKLAYMDLKEVAPFTFRGLSNVLLL 231
                                .:.:|::.:..|.....:..|.|:|..|:.:....|..||.::.|
Mouse   254 CHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSL 318

  Fly   232 TLQESDLGVICADAFTGLTQVETLQILNNKIDSIEELNFTSTAAIKHLKFFGNHVLETP----DP 292
            ||..:.:..:....|..|.|:..|.:.:|.:.::....|.:.:.::.|....|.:...|    |.
Mouse   319 TLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDT 383

  Fly   293 NSIIVDGVEHLQLVSNHFPCGCHI-----------------HTLLDGPLAEGAHNLTDFLQKNYC 340
            |..:.    :|.|:.|.:.|.||:                 ||...|| |.....|...|::...
Mouse   384 NYDLF----NLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP-AYLKGQLVPNLKQEQL 443

  Fly   341 ISPLEVNGRVMSELDIDSIGRCS---DQLTKGNLGSSAASLALGINSMLLIAVASCAEWRHVRL 401
            |.|:.........|.:|. |..:   |...:|....|..:.:....::||....|...|.:::|
Mouse   444 ICPVNPGHLSFRALGLDE-GEPAGSWDLTVEGRAAHSQCAYSNPEGTVLLACEESRCRWLNIQL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_608382.2 leucine-rich repeat 61..84 CDD:275380 3/22 (14%)
LRR_5 73..200 CDD:463839 34/223 (15%)
leucine-rich repeat 85..108 CDD:275380 6/22 (27%)
leucine-rich repeat 109..132 CDD:275380 6/70 (9%)
leucine-rich repeat 133..156 CDD:275380 6/22 (27%)
leucine-rich repeat 157..180 CDD:275380 8/22 (36%)
leucine-rich repeat 181..203 CDD:275380 4/70 (6%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
leucine-rich repeat 228..251 CDD:275380 5/22 (23%)
leucine-rich repeat 252..275 CDD:275380 3/22 (14%)
Cpn2NP_082180.2 LRRNT 21..52 CDD:214470 10/32 (31%)
LRR_5 51..>128 CDD:463839 16/76 (21%)
leucine-rich repeat 75..98 CDD:275380 6/22 (27%)
LRR 1 98..119 6/20 (30%)
leucine-rich repeat 99..122 CDD:275380 5/22 (23%)
LRR 102..395 CDD:443914 46/296 (16%)
LRR 2 122..143 0/20 (0%)
leucine-rich repeat 123..146 CDD:275380 0/22 (0%)
LRR 3 146..167 0/20 (0%)
leucine-rich repeat 147..170 CDD:275380 1/22 (5%)
LRR 4 170..191 6/20 (30%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
LRR 5 194..215 6/20 (30%)
leucine-rich repeat 195..218 CDD:275380 8/22 (36%)
LRR 6 218..239 2/20 (10%)
leucine-rich repeat 219..242 CDD:275380 2/22 (9%)
LRR 7 242..263 0/20 (0%)
leucine-rich repeat 243..266 CDD:275380 0/22 (0%)
LRR 8 266..287 2/20 (10%)
leucine-rich repeat 267..290 CDD:275380 2/22 (9%)
LRR 9 290..311 5/20 (25%)
leucine-rich repeat 291..314 CDD:275380 6/22 (27%)
LRR 10 314..335 4/20 (20%)
leucine-rich repeat 315..338 CDD:275380 5/22 (23%)
LRR 11 338..359 4/20 (20%)
leucine-rich repeat 339..360 CDD:275380 3/20 (15%)
LRR 12 362..383 3/20 (15%)
leucine-rich repeat 363..382 CDD:275380 3/18 (17%)
PCC 367..>448 CDD:188093 19/85 (22%)

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