DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and lgi3

DIOPT Version :10

Sequence 1:NP_608382.2 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_073765913.1 Gene:lgi3 / 654830 ZFINID:ZDB-GENE-060217-4 Length:567 Species:Danio rerio


Alignment Length:344 Identity:78/344 - (22%)
Similarity:138/344 - (40%) Gaps:69/344 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLVLIIALSVVVCLWNS---QQTETSKSCPAECICLSQTQVLCNTGGLEQIPLRQLPATVENLAL 66
            |.|.::    :.|::.:   ::...|..|||.|.|...:....:|   :.|| :..|..:.:|.:
Zfish    33 WSVCVL----LFCMFGTAPGRKAPKSPRCPATCSCTKDSAFCVDT---KVIP-KSFPTGIISLTM 89

  Fly    67 TKNNFPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGLQ 131
            ....|..|...:|:.:..|:.|.|:.|..:.|...||.||..|:.|.|:...:|.:::..|.||:
Zfish    90 VNAAFTEIPEGAFSHMHLLQFLLLNSNTFSVISDDAFSGLGHLQYLFIENNDIQALSKHTFRGLK 154

  Fly   132 NLSTILLSHNQIQ----------------RIEGNAFAGTSNIKLIL----LTNNPLIRI-DSSAF 175
            :|:.:.||:|.:|                .:.||:|.....||.::    .||..:..| .:|.|
Zfish   155 SLTHLSLSNNNLQVLPRELFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPPIYCASPF 219

  Fly   176 SSLTNVGHLILPSGIRSIEQDAFFGMDTVGLLKLAYMDLKEVAPFTFRGLSNVLLLTLQESDLGV 240
            .......|.:.|.....|..| |...:|.....|:      |..:.|            :.|..|
Zfish   220 EFQGRRIHELTPRDFNCISAD-FAVYETYSFQSLS------VESYEF------------QDDQYV 265

  Fly   241 ICADAFTGLTQVETLQILNNKIDSIEELNFTSTAAIKHLKFFGNHVLETPDPNSIIVDGVEHLQL 305
            :.|...||:..|.....:|....:  ..|.||.:|: :.|             .::::...:: :
Zfish   266 VFAQPNTGICTVFIWDHVNMLFKT--HYNITSRSAV-YCK-------------PVVINNTLYM-V 313

  Fly   306 VSNHFPCGCHIHTLLDGPL 324
            |:..|. |.||:...||||
Zfish   314 VAQLFG-GSHIYKWEDGPL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_608382.2 leucine-rich repeat 61..84 CDD:275380 4/22 (18%)
LRR_5 73..200 CDD:463839 38/147 (26%)
leucine-rich repeat 85..108 CDD:275380 9/22 (41%)
leucine-rich repeat 109..132 CDD:275380 7/22 (32%)
leucine-rich repeat 133..156 CDD:275380 8/38 (21%)
leucine-rich repeat 157..180 CDD:275380 7/27 (26%)
leucine-rich repeat 181..203 CDD:275380 5/21 (24%)
leucine-rich repeat 204..227 CDD:275380 3/22 (14%)
leucine-rich repeat 228..251 CDD:275380 5/22 (23%)
leucine-rich repeat 252..275 CDD:275380 5/22 (23%)
lgi3XP_073765913.1 None

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