DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and lgi2a

DIOPT Version :10

Sequence 1:NP_608382.2 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001034730.1 Gene:lgi2a / 654827 ZFINID:ZDB-GENE-060217-2 Length:536 Species:Danio rerio


Alignment Length:162 Identity:43/162 - (26%)
Similarity:84/162 - (51%) Gaps:12/162 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSVVVCLWN-----SQQTETSK---SCPAECICLSQTQVLCNTGGLEQIPLRQLPATVENLALTK 68
            :..||.:|.     :....|:|   .||:.|.| |:..::|  .|...:| |.:|..|.:|::..
Zfish     1 MRTVVIIWALLLYLAPLGNTAKKAFKCPSSCSC-SKESIIC--VGSSYVP-RYIPNDVSSLSIVN 61

  Fly    69 NNFPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGLQNL 133
            ..|..:|...|:.:.:|:.|.|:.|.:|.::..||.|||.|:.|.|:...::..::::|.||::|
Zfish    62 GTFSEVKEAMFSHMPSLQLLLLNSNALTTVRDDAFSGLPHLEYLFIENNKIETTSKYSFRGLRDL 126

  Fly   134 STILLSHNQIQRIEGNAFAGTSNIKLILLTNN 165
            :.:.|::|.|:.:....|....::..:.|..|
Zfish   127 THLSLANNNIKALPRELFIDLDSLIELDLRGN 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_608382.2 leucine-rich repeat 61..84 CDD:275380 5/22 (23%)
LRR_5 73..200 CDD:463839 25/93 (27%)
leucine-rich repeat 85..108 CDD:275380 9/22 (41%)
leucine-rich repeat 109..132 CDD:275380 6/22 (27%)
leucine-rich repeat 133..156 CDD:275380 5/22 (23%)
leucine-rich repeat 157..180 CDD:275380 2/9 (22%)
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
lgi2aNP_001034730.1 LRR_8 54..112 CDD:404697 18/57 (32%)
LRR_8 100..158 CDD:404697 13/57 (23%)
leucine-rich repeat 102..125 CDD:275378 6/22 (27%)
leucine-rich repeat 126..149 CDD:275378 5/22 (23%)
PCC 131..>206 CDD:188093 6/28 (21%)
leucine-rich repeat 150..162 CDD:275378 2/9 (22%)
EPTP 210..250 CDD:461033
EPTP 257..295 CDD:461033
EPTP 302..347 CDD:461033
EPTP 351..392 CDD:461033
EPTP 398..439 CDD:461033
EPTP 443..483 CDD:461033
EPTP 490..529 CDD:461033
Blue background indicates that the domain is not in the aligned region.

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