Sequence 1: | NP_001259742.1 | Gene: | CG1504 / 33028 | FlyBaseID: | FBgn0031100 | Length: | 425 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093494.1 | Gene: | lrrc4.2 / 566572 | ZFINID: | ZDB-GENE-030131-7997 | Length: | 644 | Species: | Danio rerio |
Alignment Length: | 376 | Identity: | 100/376 - (26%) |
---|---|---|---|
Similarity: | 173/376 - (46%) | Gaps: | 58/376 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 SW-LVLIIALSVVVCLWNSQQTETSK-SCPAECICLS-QTQVLCNTGGLEQIPLRQLPATVENLA 65
Fly 66 LTKNNFPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGL 130
Fly 131 QNLSTILLSHNQIQRIEGNAFAGTSNIKLILLTNNPLIRIDSSAFSSLTNVGHLILPSGIRSIE- 194
Fly 195 --QDAFFGMDTVGLLKLAYMDLKEVAPFT-FRGLSNVLLLTLQESDLGVICADAFTGLTQVETLQ 256
Fly 257 ILNNKIDSIEELNFTSTAAIKHLKFFGNHVLETPD----PNSIIVDGVEHLQLVSNHFPCGCHIH 317
Fly 318 TLLDGPLAEGAHNLTDFLQKN-----YCISPLEVNGRVMSELDIDSIGRCS 363 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1504 | NP_001259742.1 | leucine-rich repeat | 61..84 | CDD:275380 | 6/22 (27%) |
LRR_5 | 73..200 | CDD:404228 | 36/129 (28%) | ||
leucine-rich repeat | 85..108 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 109..132 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 133..156 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 157..180 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 181..203 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 204..227 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 228..251 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 7/22 (32%) | ||
lrrc4.2 | NP_001093494.1 | leucine-rich repeat | 71..94 | CDD:275380 | 6/22 (27%) |
LRR_8 | 72..129 | CDD:290566 | 22/80 (28%) | ||
LRR_RI | 74..>276 | CDD:238064 | 62/229 (27%) | ||
leucine-rich repeat | 95..118 | CDD:275380 | 11/46 (24%) | ||
leucine-rich repeat | 119..142 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 141..202 | CDD:290566 | 17/61 (28%) | ||
leucine-rich repeat | 143..166 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 167..191 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 192..213 | CDD:275380 | 5/20 (25%) | ||
LRR_8 | 213..272 | CDD:290566 | 17/61 (28%) | ||
leucine-rich repeat | 214..237 | CDD:275380 | 6/25 (24%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 262..283 | CDD:275380 | 3/20 (15%) | ||
LRRCT | 294..345 | CDD:214507 | 14/59 (24%) | ||
IG_like | 353..435 | CDD:214653 | |||
Ig | 365..435 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D180608at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |