Sequence 1: | NP_001259742.1 | Gene: | CG1504 / 33028 | FlyBaseID: | FBgn0031100 | Length: | 425 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001018583.1 | Gene: | lrrc4ca / 553785 | ZFINID: | ZDB-GENE-050522-533 | Length: | 647 | Species: | Danio rerio |
Alignment Length: | 364 | Identity: | 101/364 - (27%) |
---|---|---|---|
Similarity: | 158/364 - (43%) | Gaps: | 61/364 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LVLIIALSVVVCLWNSQQTETSKSCPAECICLSQ-TQVLCNTGGLEQIPLRQLPATVENLALTKN 69
Fly 70 NFPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGLQNLS 134
Fly 135 TILLSHNQIQRIEGNAFAGTSNIKLILLTNNPLIRIDSSAFSSLTNVGHLILP--SGIRSIEQDA 197
Fly 198 FFGMDTVGLLKLAYMDLKEVAPFTFRGLSNVL-LLTLQE-----SDLGVICADAFTGLTQVETLQ 256
Fly 257 ILNNKIDSIEELNFTSTAAIKHLKFFGNHVLETPDPNSIIVDGVEHLQLVSNHFPCGCHIHTLLD 321
Fly 322 GPLAEGAHNLTDFLQKN-----YCISPLEVNGRVMSELD 355 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1504 | NP_001259742.1 | leucine-rich repeat | 61..84 | CDD:275380 | 9/22 (41%) |
LRR_5 | 73..200 | CDD:404228 | 41/128 (32%) | ||
leucine-rich repeat | 85..108 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 109..132 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 133..156 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 157..180 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 181..203 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 204..227 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 228..251 | CDD:275380 | 8/28 (29%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 5/22 (23%) | ||
lrrc4ca | NP_001018583.1 | LRRNT | 48..81 | CDD:214470 | 10/33 (30%) |
LRR | <78..288 | CDD:227223 | 67/241 (28%) | ||
leucine-rich repeat | 79..102 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 103..126 | CDD:275380 | 11/46 (24%) | ||
leucine-rich repeat | 127..150 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 151..174 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 175..199 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 200..221 | CDD:275380 | 7/28 (25%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 246..269 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 270..291 | CDD:275380 | 3/20 (15%) | ||
LRRCT | 302..>340 | CDD:214507 | 10/45 (22%) | ||
IG | 361..443 | CDD:214652 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D180608at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |