Protein Alignment CG1504 and Chad

DIOPT Version :10

• Sequence 1: NP_608382.2
• Gene: CG1504 / 33028
• FlyBaseID: FBgn0031100
• Length: 425
• Species: Drosophila melanogaster
• Sequence 2: NP_062037.1
• Gene: Chad / 29195
• RGDID: 2336
• Length: 358
• Species: Rattus norvegicus
• Alignment Length: 368
• Identity: 89/368 - (24%)
• Similarity: 166/368 - (45%)
• Gaps: 38/368 - (10%)

  Fly     7 VLIIALSVVVCLWNSQQTETSKSCPAECICLSQTQ-VLCNTGGLEQIPLRQLPATVENLALTKNN 70
            ||:::|..:..|     .....:||..|.|....| |:|:..||::||  ::..|.:.|.|.:||
  Rat     4 VLLLSLVFLAIL-----LPALAACPQNCHCHGDLQHVICDKVGLQKIP--KVSETTKLLNLQRNN 61

  Fly    71 FPIIKPDSFAGLRALKKLSLDGNNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGLQNLST 135
            ||::..:||..:..|..|.|...||..:...|||||.:|..|.:.:..::::...||..|..|:.
  Rat    62 FPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTY 126

  Fly   136 ILLSHNQIQRIEGNAFAGTSNIKLILLTNNPLIRIDSSAFSSLTNVGHLIL-PSGIRSIEQDAFF 199
            :.|.||::..:.....:...|:.::.|.||.:..:.:.||....::..|.| .:.:.|:...:
  Rat   127 LYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGS-- 189

  Fly   200 GMDTVGLLKLAYMDLKEVAPFTFRGLSNVLL---LTLQESDLGVICADAFTGLTQ-VETLQILNN 260
             :|.|..|...::|..:::.:....||.:.:   |.|..:.|..|..:||....: :|||.:.|.
  Rat   190 -LDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNT 253

  Fly   261 KIDSIEELNFTSTAAIKHLKFFGNHVLETPDPNSIIVDGVEHLQLVSNHFPCGCHIHTLLDGPLA 325
            .::...:..|.....:||:....|.:.:.  |::...|.:|.|.|.:|.:.|.|.:
  Rat   254 NLEKFSDAAFAGVTTLKHVHLENNRLNQL--PSTFPFDNLETLTLTNNPWKCTCQL--------- 307

  Fly   326 EGAHNLTDFLQKN------YCISPLEVNGRVMSELDIDSIGRC 362
               ..|..:|:..      .|.||.:..|:.:.  |.|::..|
  Rat   308 ---RGLRRWLEAKTSRPDATCSSPAKFKGQRIR--DTDALRSC 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1504	NP_608382.2	leucine-rich repeat	61..84	CDD:275380	8/22 (36%)
		LRR_5	73..200	CDD:463839	30/127 (24%)
		leucine-rich repeat	85..108	CDD:275380	10/22 (45%)
		leucine-rich repeat	109..132	CDD:275380	5/22 (23%)
		leucine-rich repeat	133..156	CDD:275380	4/22 (18%)
		leucine-rich repeat	157..180	CDD:275380	5/22 (23%)
		leucine-rich repeat	181..203	CDD:275380	3/22 (14%)
		leucine-rich repeat	204..227	CDD:275380	4/22 (18%)
		leucine-rich repeat	228..251	CDD:275380	6/25 (24%)
		leucine-rich repeat	252..275	CDD:275380	5/22 (23%)
Chad	NP_062037.1	LRRNT	22..48	CDD:396168	11/27 (41%)
		LRR	49..>300	CDD:443914	62/255 (24%)
		LRR 1	51..72		9/20 (45%)
		leucine-rich repeat	52..75	CDD:275380	8/22 (36%)
		LRR 2	75..96		7/20 (35%)
		leucine-rich repeat	76..99	CDD:275380	10/22 (45%)
		LRR 3	99..120		4/20 (20%)
		leucine-rich repeat	100..123	CDD:275380	5/22 (23%)
		LRR 4	123..144		4/20 (20%)
		leucine-rich repeat	124..147	CDD:275380	4/22 (18%)
		LRR 5	147..168		6/20 (30%)
		leucine-rich repeat	148..171	CDD:275380	5/22 (23%)
		LRR 6	171..192		3/23 (13%)
		leucine-rich repeat	172..195	CDD:275380	5/25 (20%)
		LRR 7	195..216		3/20 (15%)
		leucine-rich repeat	196..219	CDD:275380	4/22 (18%)
		LRR 8	219..240		6/20 (30%)
		leucine-rich repeat	220..243	CDD:275380	6/22 (27%)
		LRR 9	244..265		5/20 (25%)
		leucine-rich repeat	245..268	CDD:275380	5/22 (23%)
		LRR 10	268..289		4/22 (18%)
		LRRCT	299..346	CDD:214507	12/61 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	321..358		7/27 (26%)