DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and Nyx

DIOPT Version :9

Sequence 1:NP_001259742.1 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_775591.1 Gene:Nyx / 236690 MGIID:2448607 Length:476 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_001259742.1 leucine-rich repeat 61..84 CDD:275380
LRR_5 73..200 CDD:404228
leucine-rich repeat 85..108 CDD:275380
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..227 CDD:275380
leucine-rich repeat 228..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
NyxNP_775591.1 LRRNT 25..56 CDD:214470
LRR 1 58..79
LRR_8 61..115 CDD:338972
leucine-rich repeat 63..82 CDD:275380
LRR_RI <68..312 CDD:393385
LRR 2 82..103
leucine-rich repeat 83..106 CDD:275380
LRR 3 106..128
leucine-rich repeat 107..131 CDD:275380
LRR 4 131..154
leucine-rich repeat 132..155 CDD:275380
LRR 5 155..177
leucine-rich repeat 156..178 CDD:275380
LRR 6 178..199
leucine-rich repeat 179..202 CDD:275380
LRR 7 202..223
leucine-rich repeat 203..226 CDD:275380
LRR 8 226..247
leucine-rich repeat 227..250 CDD:275380
LRR_8 250..309 CDD:338972
LRR 9 250..271
leucine-rich repeat 251..274 CDD:275380
LRR 10 274..295
leucine-rich repeat 275..296 CDD:275380
LRR 11 298..319
leucine-rich repeat 299..322 CDD:275378
leucine-rich repeat 323..335 CDD:275378
LRRCT 331..>366 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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