DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and lron-12

DIOPT Version :9

Sequence 1:NP_001259742.1 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001366666.1 Gene:lron-12 / 190700 WormBaseID:WBGene00013542 Length:398 Species:Caenorhabditis elegans


Alignment Length:317 Identity:74/317 - (23%)
Similarity:147/317 - (46%) Gaps:19/317 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SCPAECIC-LSQTQVLCNTGGLEQIPLRQLPATVENLALTKNNFPIIKPDSFAGLRALKKLSLDG 92
            :||..|.| ..:.||.|....:..:|.| ||:..|:|.:..::...|:.:||..:..|.::..:.
 Worm    33 TCPMGCQCDEDKQQVTCEGQQVVTLPDR-LPSGYESLVIRNSSVRTIEKNSFRKMEKLMQIEFEN 96

  Fly    93 N-NITRIKQFAFRGLPRLKELSIQYTP-LQMVAQFAFAGLQNLS--TILLSHNQIQRIEGNAFAG 153
            | |:..|::.||:||.:::.:.....| |..:.:.||:|:||..  .|:.....|.||:|:.|..
 Worm    97 NPNLGTIEKLAFKGLKKIRLIKFTTCPGLTELQKNAFSGIQNQMGLKIIFEKTPIHRIDGHTFRN 161

  Fly   154 TSNIKLILLTNNPLIRIDSSAFSSLTNVGHLILPSGIRSIEQDAFFGMDTVGLLKLAYMDLKEVA 218
            ..||:.:.::...| .:....|:::..:..|.: ||:..||.:.|.......::....... ::.
 Worm   162 AQNIRELTISGEEL-ALSRHCFANINQLDFLTV-SGVVLIEPEIFTNSTRFHVVHFKNSQF-DIP 223

  Fly   219 PFTFRGLSNVLLLTLQESDLGVICADAFTGLTQVETLQILNNKIDSIEELNFTSTAAIKHLKFFG 283
            |.||..||:...|.::.|.:..|..|||:|||.::.:::...::.:|....|.:...:..||...
 Worm   224 PSTFSTLSHTSHLLIEHSKVPSIAPDAFSGLTTIQVIELHACQLGTISARAFANVENLGELKILR 288

  Fly   284 NHVLETPDPNSIIVDGVEHLQLVSNHFPCGCHIHTLLDGPLAEGAHNLTDFLQKNYC 340
            |.:.:.....||:...:: .::..|...|.|.:..:      .....::|.   |:|
 Worm   289 NTIGDLDTSESIMSRALK-TRIEENTLECSCGMKWM------TSVEEMSDI---NFC 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_001259742.1 leucine-rich repeat 61..84 CDD:275380 5/22 (23%)
LRR_5 73..200 CDD:404228 34/130 (26%)
leucine-rich repeat 85..108 CDD:275380 8/23 (35%)
leucine-rich repeat 109..132 CDD:275380 5/23 (22%)
leucine-rich repeat 133..156 CDD:275380 6/24 (25%)
leucine-rich repeat 157..180 CDD:275380 3/22 (14%)
leucine-rich repeat 181..203 CDD:275380 6/21 (29%)
leucine-rich repeat 204..227 CDD:275380 4/22 (18%)
leucine-rich repeat 228..251 CDD:275380 8/22 (36%)
leucine-rich repeat 252..275 CDD:275380 2/22 (9%)
lron-12NP_001366666.1 leucine-rich repeat 45..67 CDD:275380 7/22 (32%)
LRR_5 66..184 CDD:404228 30/118 (25%)
leucine-rich repeat 68..88 CDD:275380 4/19 (21%)
leucine-rich repeat 89..113 CDD:275380 8/23 (35%)
leucine-rich repeat 114..138 CDD:275380 5/23 (22%)
leucine-rich repeat 139..164 CDD:275380 6/24 (25%)
leucine-rich repeat 165..187 CDD:275380 3/22 (14%)
leucine-rich repeat 188..209 CDD:275380 6/21 (29%)
leucine-rich repeat 210..232 CDD:275380 4/22 (18%)
LRR_8 <221..267 CDD:404697 14/45 (31%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..277 CDD:275380 2/19 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I3671
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28818
OrthoDB 1 1.010 - - D180608at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto18302
orthoMCL 1 0.900 - - OOG6_112733
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.840

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