DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1504 and prelp

DIOPT Version :9

Sequence 1:NP_001259742.1 Gene:CG1504 / 33028 FlyBaseID:FBgn0031100 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_001923590.1 Gene:prelp / 100144408 ZFINID:ZDB-GENE-080327-24 Length:378 Species:Danio rerio


Alignment Length:330 Identity:82/330 - (24%)
Similarity:133/330 - (40%) Gaps:66/330 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CPAECIC--LSQTQVLCNTGGLEQIPLRQLPATVENLALTKNNFPIIKPDSFAGLRALKKLSLDG 92
            ||.||.|  .....:.|....|.::|:  :|.....|.|..|....:..:||.....||.::|..
Zfish    75 CPRECFCPPSHPNALYCENRNLRKVPI--IPFRTHYLYLQNNYIDQVTAESFKNCTELKWINLGN 137

  Fly    93 NNITRIKQFAFRGLPRLKELSIQYTPLQMVAQFAFAGLQNLSTILLSHNQIQRIEGNAFAGTSNI 157
            |.|..:::..|..||.|..|.:|...|:.|.....|||:.|.   ||.|||.:|...||:...::
Zfish   138 NRIRSVEKQVFEKLPNLLYLYMQRNELKEVPDDLPAGLEQLR---LSRNQISKIPPGAFSKMEHL 199

  Fly   158 KLILLTNNPLIRIDSSA-----FSSL-----TNVGHLIL-----------------PSGIRSIEQ 195
            .|:.|.:|   ||..|:     |..|     .|:.|.||                 .:.|..|.|
Zfish   200 ALLDLHHN---RISDSSMGKNIFKDLKNLIQLNLAHNILRKMPANIPNTLFQLFLDRNNIEEIPQ 261

  Fly   196 DAFFGMDTVGLLKLAYMDLKEVA-PFTFRGLSNVLLLTLQESDLGVICADAFTGLTQVETLQILN 259
            |.|....::..::|.|..:.:.. |.:...:|::|.|.|..:.|..:  ..|.  :::|.|.:.|
Zfish   262 DYFKNFASLAFVRLNYNQISDKGLPKSVFNVSSLLDLHLAHNKLSNV--PLFN--SELEQLHLNN 322

  Fly   260 NKIDSIEELNF---------TSTAAIKHLKFFGNHVLETPDPNSIIVDGVEHLQLVSNHFPCGCH 315
            |.|:|:.....         .....:::|:..||| |..|.|..:|:              |..|
Zfish   323 NNIESVNGTEICPPHNVHDENGAPKLRYLRLDGNH-LSPPVPLDVIM--------------CFRH 372

  Fly   316 IHTLL 320
            :|.::
Zfish   373 LHAIV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1504NP_001259742.1 leucine-rich repeat 61..84 CDD:275380 5/22 (23%)
LRR_5 73..200 CDD:404228 44/153 (29%)
leucine-rich repeat 85..108 CDD:275380 7/22 (32%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
leucine-rich repeat 133..156 CDD:275380 9/22 (41%)
leucine-rich repeat 157..180 CDD:275380 8/32 (25%)
leucine-rich repeat 181..203 CDD:275380 8/38 (21%)
leucine-rich repeat 204..227 CDD:275380 3/23 (13%)
leucine-rich repeat 228..251 CDD:275380 5/22 (23%)
leucine-rich repeat 252..275 CDD:275380 6/31 (19%)
prelpXP_001923590.1 LRRNT 74..106 CDD:214470 9/32 (28%)
leucine-rich repeat 89..105 CDD:275380 4/17 (24%)
leucine-rich repeat 106..129 CDD:275380 5/22 (23%)
LRR_RI <107..319 CDD:238064 57/221 (26%)
LRR_8 128..209 CDD:290566 28/86 (33%)
leucine-rich repeat 130..153 CDD:275380 7/22 (32%)
leucine-rich repeat 154..169 CDD:275380 5/14 (36%)
leucine-rich repeat 175..198 CDD:275380 10/25 (40%)
LRR_8 198..280 CDD:290566 19/84 (23%)
leucine-rich repeat 199..224 CDD:275380 8/27 (30%)
leucine-rich repeat 225..245 CDD:275380 4/19 (21%)
leucine-rich repeat 246..269 CDD:275380 5/22 (23%)
leucine-rich repeat 270..294 CDD:275380 3/23 (13%)
LRR_8 298..358 CDD:290566 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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