DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17065 and amdhd2

DIOPT Version :10

Sequence 1:NP_001162805.1 Gene:CG17065 / 33026 FlyBaseID:FBgn0031099 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_021325611.2 Gene:amdhd2 / 402981 ZFINID:ZDB-GENE-040426-1871 Length:439 Species:Danio rerio


Alignment Length:418 Identity:230/418 - (55%)
Similarity:302/418 - (72%) Gaps:16/418 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ESPEQKILASSQRLLQFTNCRLVRDHRIIHDDLWVRDGRIVNPEPVFFDERTKAHCRIDCGGAII 77
            :.|..|.: |...:.||.|||::::|::..:|||||:|:|:|||.:||||:..|..|:||...||
Zfish    35 DMPSNKSV-SDAPITQFVNCRILKNHKLQWEDLWVREGKILNPEKLFFDEQGFADHRVDCENKII 98

  Fly    78 APGYIDLQINGGYGVDFSYDTETIEEGVATVARGLVKSGVTSFCPTLVTSPSDSYHTILP--RIP 140
            |||:||:|:|||||:|||..:..|..|||.||:.:::.|||||||||||||...||.::|  |:.
Zfish    99 APGFIDVQLNGGYGIDFSQASSDIRGGVALVAKKILEHGVTSFCPTLVTSPPHIYHKVIPELRVQ 163

  Fly   141 AEVPKGAGILGIHAEGPFINPQKKGAHPEHCIQTIDKRDHSNVTFRLPRLKGLSTLKETYGSLER 205
            ...|:|||:||||.|||||:.:|:||||...::|...             .|::.|.||||.||.
Zfish   164 DGGPEGAGVLGIHLEGPFISEEKRGAHPPKFLRTFQS-------------GGVADLMETYGQLEN 215

  Fly   206 IKIITLAPEKVTDPEVIGQLVERGITVALGHSMASLSDGERAVQQGATLITHLFNAMLPFHHRDP 270
            :.::|||||.......|.:|..|||||::|||||.||..|.|||.|||.||||||||||||||||
Zfish   216 VAMVTLAPELTNSAAAIHELSSRGITVSVGHSMADLSQAEEAVQNGATFITHLFNAMLPFHHRDP 280

  Fly   271 GLVGLLASDAVPHGRTVYFGIISDGVHTHPAALRIAYRTHPQGLILVTDAISALGLEEGVHHIGQ 335
            |:||||.||.:|.|||||:|:|:||:||||||||||:|.||.||:|||||::|:||..|.|.:||
Zfish   281 GIVGLLTSDRIPPGRTVYYGMIADGIHTHPAALRIAHRAHPAGLVLVTDAVTAMGLPPGRHTLGQ 345

  Fly   336 LPLQVKQGKAFIAGTETLCGSIAPMDECVRIFQKATDCSVVYAIEAATLHPAQCLKIEKQKGTLD 400
            ..:.::...|::|||.||.||||.||.|||.|::|:.|:|..|:|||:|||||.|.|..:||||:
Zfish   346 QQIDIQGLHAYVAGTTTLSGSIATMDMCVRHFREASGCTVEAALEAASLHPAQLLGISHRKGTLE 410

  Fly   401 FGSDADFVLLDDQLRVLSTWIAGVCVHR 428
            ||:||||::|||.|.|..|:|||..|.|
Zfish   411 FGADADFIVLDDMLTVRETYIAGQQVWR 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17065NP_001162805.1 NagA 27..423 CDD:238434 223/397 (56%)
amdhd2XP_021325611.2 NagA 48..433 CDD:238434 223/397 (56%)

Return to query results.
Submit another query.