DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17065 and amdhd2

DIOPT Version :9

Sequence 1:NP_001162805.1 Gene:CG17065 / 33026 FlyBaseID:FBgn0031099 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001120283.1 Gene:amdhd2 / 100145339 XenbaseID:XB-GENE-976354 Length:408 Species:Xenopus tropicalis


Alignment Length:414 Identity:232/414 - (56%)
Similarity:310/414 - (74%) Gaps:16/414 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PEQKILASSQRLLQFTNCRLVRDHRIIHDDLWVRDGRIVNPEPVFFDERTKAHCRIDCGGAIIAP 79
            |..|.: |...::||.|||::|||.:..:|||||.|:::|||.:||||:..|..::||.|.||||
 Frog     2 PSNKSV-SDAPIVQFRNCRILRDHTLQREDLWVRQGKVLNPEKLFFDEKGYADMQVDCRGLIIAP 65

  Fly    80 GYIDLQINGGYGVDFSYDTETIEEGVATVARGLVKSGVTSFCPTLVTSPSDSYHTILPRIPAE-- 142
            |:||.|:|||:|||||:::..::.|:..|::.::..||||||||||||||..||.:||:|...  
 Frog    66 GFIDTQLNGGFGVDFSFESNDVKTGICVVSKNILSHGVTSFCPTLVTSPSSVYHKVLPQISVRDG 130

  Fly   143 VPKGAGILGIHAEGPFINPQKKGAHPEHCIQTIDKRDHSNVTFRLPRLKGLSTLKETYGSLERIK 207
            .|:|||:||:|.|||:|:.:|||||||||:::..:|             |.:.|.:|||:||.:.
 Frog   131 GPEGAGVLGVHLEGPYISREKKGAHPEHCLRSFSER-------------GFADLLDTYGTLENVS 182

  Fly   208 IITLAPEKVTDPEVIGQLVERGITVALGHSMASLSDGERAVQQGATLITHLFNAMLPFHHRDPGL 272
            ::|||||.....|||.:||:|||.|:||||:|:||..|.||..||:.|||||||||||||||||:
 Frog   183 LVTLAPEMERSTEVIKELVQRGICVSLGHSVANLSQAEDAVSHGASFITHLFNAMLPFHHRDPGI 247

  Fly   273 VGLLASDAVPHGRTVYFGIISDGVHTHPAALRIAYRTHPQGLILVTDAISALGLEEGVHHIGQLP 337
            ||||.||.:|.|:|||:|:|:||:||:|||||||:|.||:||:||||||:|:||..|.|.:||..
 Frog   248 VGLLTSDQIPKGKTVYYGMIADGIHTNPAALRIAHRAHPKGLVLVTDAITAMGLGPGKHTLGQQE 312

  Fly   338 LQVKQGKAFIAGTETLCGSIAPMDECVRIFQKATDCSVVYAIEAATLHPAQCLKIEKQKGTLDFG 402
            :.::...|::|||.||.||||.||.|||.|.:||.|:|..|:|||:|||||.|.|:..|||||||
 Frog   313 ILIEGLNAYVAGTHTLAGSIATMDMCVRHFHEATGCTVEEALEAASLHPAQVLGIQDHKGTLDFG 377

  Fly   403 SDADFVLLDDQLRVLSTWIAGVCV 426
            :|||||||||.|.|.:|:|||..|
 Frog   378 ADADFVLLDDSLHVKATYIAGKLV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17065NP_001162805.1 NagA 27..423 CDD:238434 226/397 (57%)
HutI 38..431 CDD:224149 222/391 (57%)
amdhd2NP_001120283.1 NagA 13..398 CDD:238434 226/397 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 427 1.000 Domainoid score I602
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9311
Inparanoid 1 1.050 489 1.000 Inparanoid score I1395
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1066877at2759
OrthoFinder 1 1.000 - - FOG0006638
OrthoInspector 1 1.000 - - oto103310
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4676
SonicParanoid 1 1.000 - - X4269
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

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