DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and Rab35

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_937806.1 Gene:Rab35 / 77407 MGIID:1924657 Length:201 Species:Mus musculus


Alignment Length:204 Identity:92/204 - (45%)
Similarity:144/204 - (70%) Gaps:9/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
            :.||.|||||:||||||||:.:|.||:|:.|:.::|:|||:||||:|||:.|:|:||||||||||
Mouse     3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67

  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            |||.|||::||||..|:::|||:|:.:||.|:.:||..|:::. :||.::::|||.|..:::||.
Mouse    68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVE 131

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAIL----DKTSGRESAENQERVIIDRRNQE 194
            .|.....|.:.||:..|||||.|:|:|..|..:.|.:|    |..:.::..:..:.|.:.:.::.
Mouse   132 TEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR 196

  Fly   195 KAPGYSKCC 203
            |    .:||
Mouse   197 K----KRCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 86/169 (51%)
Rab35NP_937806.1 Rab35 3..201 CDD:133310 90/202 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q15286 30..42 4/11 (36%)
Effector region. /evidence=ECO:0000250 37..45 4/7 (57%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q15286 64..80 12/15 (80%)

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