DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and rasef

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:XP_699335.4 Gene:rasef / 570731 ZFINID:ZDB-GENE-081105-157 Length:706 Species:Danio rerio


Alignment Length:202 Identity:70/202 - (34%)
Similarity:114/202 - (56%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTI 74
            ::::|.||:.|||:..|.|...:.|.....:|:|:||::||:.:.|....||:|||||||||.:|
Zfish   508 YRIVLAGDAAVGKSSFLLRLCKNEFKGNTSATLGVDFQMKTLVVDGVPTVLQLWDTAGQERFRSI 572

  Fly    75 TTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRV------VN 133
            ..||:|.|.|::|:||:|.||||.|:.:|:..|::.:.:|:..|::|||.|:..:.:      :.
Zfish   573 AKSYFRRADGVLLLYDVTCEKSFLNVREWVDIIEDVSQDDIPIMLVGNKTDLRKEALQDGVTCIP 637

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDR--RNQEKA 196
            ...||.:|..:...|.|||||...||..|...||..:.     :.:.:.:|.|.:.:  .|..|.
Zfish   638 TSYGEKLAMTYSALFCETSAKDGSNIIEAVLHLAREVT-----KHADDYKEPVSVAKLSGNHTKK 697

  Fly   197 PGYSKCC 203
            .....||
Zfish   698 MSSPNCC 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 64/168 (38%)
rasefXP_699335.4 FRQ1 <4..72 CDD:444056
SMC_prok_B <139..>330 CDD:274008
Rab 508..672 CDD:206640 63/163 (39%)
Blue background indicates that the domain is not in the aligned region.

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