DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and rab12

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001018466.1 Gene:rab12 / 553657 ZFINID:ZDB-GENE-050522-555 Length:235 Species:Danio rerio


Alignment Length:203 Identity:93/203 - (45%)
Similarity:138/203 - (67%) Gaps:6/203 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 71
            |...::::||..|||||.::.||:||.|.....||:|:||||||||||||||:||||||||||||
Zfish    33 DYKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 97

  Fly    72 HTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKER 136
            ::||::|||||.||:||||||.:::||::.||::.||::|:||.|.:::|||.|....|.:::::
Zfish    98 NSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESDRAISRQQ 162

  Fly   137 GEAIA-REHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDRRNQ-----EK 195
            .|..| |..|:||.|.|||.|.|::..|.:|.:.||.|......::.....::..:.:     |.
Zfish   163 AERFASRISGMRFCEASAKDNFNVDEIFLKLVDDILSKMPLEVPSKELSNSVLSLQPEPEIPPEL 227

  Fly   196 APGYSKCC 203
            .|...:||
Zfish   228 PPPRMRCC 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 88/166 (53%)
rab12NP_001018466.1 Rab12 36..235 CDD:206699 90/198 (45%)

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