DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and Rab44

DIOPT Version :9

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001351777.1 Gene:Rab44 / 442827 MGIID:3045302 Length:973 Species:Mus musculus


Alignment Length:164 Identity:64/164 - (39%)
Similarity:100/164 - (60%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 71
            |.|:.::.:|||.||||..|.....|||.:...:|:|:||::|.:.:..|...||:||||||||:
Mouse   783 DYLYHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERY 847

  Fly    72 HTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKER 136
            |::|....|.|.|::|:||:|:::||.::..||..:.:...|.|..::||||.|..::|.|..|.
Mouse   848 HSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCEEERQVPTEA 912

  Fly   137 GEAIAREHGIRFMETSAKSNINIERAFCELAEAI 170
            |..:|:|.|:.|.|.||....||......||.::
Mouse   913 GRRLAQELGVSFGECSAALGHNILEPMMNLARSL 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 64/164 (39%)
Rab44NP_001351777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
EF-hand_7 45..101 CDD:372618
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..140
SMC_prok_B <173..353 CDD:274008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..481
PHA03247 <425..783 CDD:223021 64/164 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 724..779
Rab 788..944 CDD:206640 61/155 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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