DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and rab3c

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001002530.2 Gene:rab3c / 436803 ZFINID:ZDB-GENE-040718-263 Length:224 Species:Danio rerio


Alignment Length:178 Identity:94/178 - (52%)
Similarity:130/178 - (73%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
            :.:|.:||||:||:|.||||..|||::||.|||.|:||:|||||:|||....|:|||||||||||
Zfish    21 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYKNDKRIKLQIWDTAGQ 85

  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            ||:.||||:|||||||.:|:||||||:||..:..|...|..::.::.:.::.||||||.::|:|:
Zfish    86 ERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQIKTYSWDNAQVILAGNKCDMEEERIVS 150

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAE 181
            .:.|..:|.:.|..|.|||||.|||:::.|..|.:.|.||.|....|:
Zfish   151 VDSGRLLAEQLGFEFFETSAKDNINVKQTFDRLVDIICDKMSDTLEAD 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 90/165 (55%)
rab3cNP_001002530.2 Rab3 26..190 CDD:206657 89/163 (55%)

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