DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and Rab8b

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_775589.1 Gene:Rab8b / 235442 MGIID:2442982 Length:207 Species:Mus musculus


Alignment Length:204 Identity:137/204 - (67%)
Similarity:164/204 - (80%) Gaps:7/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
            ||||.||||||||||||||||:|||||:|||.:||||||||||||:|:||.||||||||||||||
Mouse     3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67

  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            |||.||||:||||||||||||||||||||:||..|:|||:|||:.|||:|||||||||.|||.|:
Mouse    68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERV-----IIDRRNQ 193
            |||||.:|.::||:|:||||||:.|:|.||..||..|:.|.:.:.:..|....     |.:.|: 
Mouse   133 KERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITESRS- 196

  Fly   194 EKAPGYSKC 202
             |...:.:|
Mouse   197 -KKTSFFRC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 128/165 (78%)
Rab8bNP_775589.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 128/165 (78%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 11/13 (85%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 14/16 (88%)

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