DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and Rab12

DIOPT Version :9

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_077768.3 Gene:Rab12 / 19328 MGIID:894284 Length:291 Species:Mus musculus


Alignment Length:168 Identity:87/168 - (51%)
Similarity:128/168 - (76%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 71
            |...::::||..|||||.::.||:||.|.....||:|:||||||||||||||:||||||||||||
Mouse    87 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 151

  Fly    72 HTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKER 136
            ::||::|||.|.||:||||||.:::|:::.||::.||::|:||.|.:::|||.|....|.:::::
Mouse   152 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQ 216

  Fly   137 GEAIARE-HGIRFMETSAKSNINIERAFCELAEAILDK 173
            ||..|:: .|:||.|.|||.|.|::..|.:|.:.||.|
Mouse   217 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 86/166 (52%)
Rab12NP_077768.3 Rab12 90..291 CDD:206699 86/165 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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