DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and Rab1a

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_033022.1 Gene:Rab1a / 19324 MGIID:97842 Length:205 Species:Mus musculus


Alignment Length:198 Identity:104/198 - (52%)
Similarity:145/198 - (73%) Gaps:0/198 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 70
            ||.||||||||||||||:|:|.||:||.:|.::|||||:||||:|:||.||.|||||||||||||
Mouse     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKE 135
            |.|||:||||||.||::|||:|:::||.|:.:||:.||.:|:|:|.|:::|||||:|.|:||:..
Mouse    73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 137

  Fly   136 RGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDRRNQEKAPGYS 200
            ..:..|...||.|:|||||:..|:|::|..:|..|..:.....:|...|:..:..::........
Mouse   138 TAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGG 202

  Fly   201 KCC 203
            .||
Mouse   203 GCC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 99/165 (60%)
Rab1aNP_033022.1 Rab1_Ypt1 10..175 CDD:206661 98/164 (60%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 34..48 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 66..83 14/16 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..205 2/26 (8%)

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