Protein Alignment Rab10 and rab-28

DIOPT Version :9

• Sequence 1: NP_523419.1
• Gene: Rab10 / 33025
• FlyBaseID: FBgn0015789
• Length: 204
• Species: Drosophila melanogaster
• Sequence 2: NP_501609.1
• Gene: rab-28 / 189429
• WormBaseID: WBGene00004281
• Length: 248
• Species: Caenorhabditis elegans
• Alignment Length: 198
• Identity: 58/198 - (29%)
• Similarity: 102/198 - (51%)
• Gaps: 8/198 - (4%)

  Fly     7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVEL-RGKKIKLQIWDTAGQER 70
            |.:.|::::||...|||.|..||:.::|..::..|:|:||..:.:.| ...::.:|:||..||..
 Worm    33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSI 97

  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANED---VEKMILGNKCDMTDKRVV 132
            ...:...|..||..:.||||:||.|||||.|.||..:.::....   |:.:::|||.|:.::|||
 Worm    98 AGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVV 162

  Fly   133 NKERGEAIAREHGIRFMETSAKSN----INIERAFCELAEAILDKTSGRESAENQERVIIDRRNQ 193
            :.|..:..|..:.:.....|||:.    :...:|..|:....|.:.......|..:..:|::..|
 Worm   163 SVEAHKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEVLNVGLSRAEVEADIEIVQGSVIEQPKQ 227

  Fly   194 EKA 196
            ..|
 Worm   228 SDA 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab10	NP_523419.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	54/173 (31%)
rab-28	NP_501609.1	Rab28	36..248	CDD:206694	57/195 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810