DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and rabr-2

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001255966.1 Gene:rabr-2 / 181797 WormBaseID:WBGene00007067 Length:395 Species:Caenorhabditis elegans


Alignment Length:201 Identity:71/201 - (35%)
Similarity:115/201 - (57%) Gaps:10/201 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVEL-RGKKIKLQIWDTAGQER 70
            |.:||::.:|||.|||||.|.||..:.|...|.:|||:||.:||::: ..:.|.:|:||||||||
 Worm   200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQER 264

  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNK- 134
            |.:||..|:|.|.|::|::|:|:|:||.|:..|:.::....::.....::|||.|:....:... 
 Worm   265 FRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSA 329

  Fly   135 --ERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDRRNQEKAP 197
              ...|.:|.|..|.|.||||.:...|:....::||.:    ..||....:|.:.:|..:..|..
 Worm   330 VYRAAEKLAVEFKIPFFETSAYTGFGIDTCMRQMAENL----QRREDNHLEEALKLDINSNYKKR 390

  Fly   198 GYSKCC 203
            .:  ||
 Worm   391 SW--CC 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 64/169 (38%)
rabr-2NP_001255966.1 Rab 203..365 CDD:206640 61/161 (38%)

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