DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and K02E10.1

DIOPT Version :9

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_508455.2 Gene:K02E10.1 / 180554 WormBaseID:WBGene00019317 Length:218 Species:Caenorhabditis elegans


Alignment Length:209 Identity:92/209 - (44%)
Similarity:136/209 - (65%) Gaps:9/209 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 69
            :|:.|||::::||...||:|||.||::::|....|||:|:|||:||::|...||:|::|||||.|
 Worm     2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGME 66

  Fly    70 RFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            |:.||..|||..|.|:|.|||:||||||||:.| ||:.|.:||..:...|::|||.||..:|.|:
 Worm    67 RYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVD 131

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDK-TSGR----ESAENQE---RVIIDR 190
            .:|.|.:|...|:...|.|||:.||.|.||..|..|:.:: |:|.    ||.:|:|   ...:|.
 Worm   132 FDRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERITAGSMHSDESDDNEEFSSAFHVDG 196

  Fly   191 RNQEKAPGYSKCCA 204
            ..:.....::.|||
 Worm   197 VIKSDKGKFTSCCA 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 81/166 (49%)
K02E10.1NP_508455.2 Rab 7..165 CDD:206640 78/157 (50%)
RAB 7..164 CDD:197555 78/156 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47980
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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