Protein Alignment Rab10 and Rab3c

DIOPT Version :9

• Sequence 1: NP_523419.1
• Gene: Rab10 / 33025
• FlyBaseID: FBgn0015789
• Length: 204
• Species: Drosophila melanogaster
• Sequence 2: NP_598220.1
• Gene: Rab3c / 171058
• RGDID: 620923
• Length: 227
• Species: Rattus norvegicus
• Alignment Length: 183
• Identity: 99/183 - (54%)
• Similarity: 134/183 - (73%)
• Gaps: 2/183 - (1%)

  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
            :.:|.:||||:||:|.||||..|||::||:|||.|:||:|||||:|||....|:|||||||||||
  Rat    25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQ 89

  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            ||:.||||:|||||||.:|:||||||:||..:..|...|..::.::.:.:::||||||.|:|||:
  Rat    90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVVS 154

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERV 186
            .|||..:..:.|..|.|||||.|||:::.|..|.:.|.||.|  ||.|....:
  Rat   155 TERGRHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMS--ESLETDPAI 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab10	NP_523419.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	93/165 (56%)
Rab3c	NP_598220.1	Rab3	30..194	CDD:206657	92/163 (56%)
		RAB	31..191	CDD:197555	91/159 (57%)
		Effector region. /evidence=ECO:0000250	59..67		5/7 (71%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	202..227		0/4 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910