Protein Alignment Rab10 and Rab28

DIOPT Version :9

• Sequence 1: NP_523419.1
• Gene: Rab10 / 33025
• FlyBaseID: FBgn0015789
• Length: 204
• Species: Drosophila melanogaster
• Sequence 2: NP_446430.1
• Gene: Rab28 / 117049
• RGDID: 620891
• Length: 221
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 66/214 - (30%)
• Similarity: 106/214 - (49%)
• Gaps: 12/214 - (5%)

  Fly     3 KKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGK-KIKLQIWDTA 66
            :::.|...|::::||...|||.:...|:.:.|...:..|||:||.::.:.|.|. .:.||:||..
  Rat     6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIG 70

  Fly    67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKW---LRNIDEHANEDVEKMILGNKCDMTD 128
            ||.....:...|..||.||:|||||||.:||||:..|   ::.:.|.:.......::|||.|:..
  Rat    71 GQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEH 135

  Fly   129 KRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVI---IDR 190
            .|.|..::.....:|:|......|||:..::...|.::|..||.....:...|..:||:   |..
  Rat   136 MRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKAEIEQSQRVVKADIVN 200

  Fly   191 RNQEKA-----PGYSKCCA 204
            .|||..     |..|..||
  Rat   201 YNQEPMSRTVNPPRSSMCA 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab10	NP_523419.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	55/169 (33%)
Rab28	NP_446430.1	Rab28	13..221	CDD:206694	65/207 (31%)
		Effector region. /evidence=ECO:0000250	41..49		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810