DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab10 and RAB3C

DIOPT Version :10

Sequence 1:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_612462.1 Gene:RAB3C / 115827 HGNCID:30269 Length:227 Species:Homo sapiens


Alignment Length:204 Identity:103/204 - (50%)
Similarity:143/204 - (70%) Gaps:5/204 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
            :.:|.:||||:||:|.||||..|||::||:|||.|:||:|||||:|||....|:|||||||||||
Human    25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQ 89

  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133
            ||:.||||:|||||||.:|:||||||:||..:..|...|..::.::.:.:::||||||.|:||::
Human    90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVIS 154

  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDRRN---QEK 195
            .|||:.:..:.|..|.|||||.|||:::.|..|.:.|.||.|  ||.|....:...::|   :|.
Human   155 TERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMS--ESLETDPAITAAKQNTRLKET 217

  Fly   196 APGYSKCCA 204
            .|.....||
Human   218 PPPPQPNCA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 92/165 (56%)
RAB3CNP_612462.1 Rab3 30..194 CDD:206657 91/163 (56%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P10949 53..66 8/12 (67%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P10949 86..104 14/17 (82%)

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