Protein Alignment Rab10 and Rab1b

DIOPT Version :9

• Sequence 1: NP_523419.1
• Gene: Rab10 / 33025
• FlyBaseID: FBgn0015789
• Length: 204
• Species: Drosophila melanogaster
• Sequence 2: NP_001103449.1
• Gene: Rab1b / 100126191
• RGDID: 1642882
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 109/200 - (54%)
• Similarity: 149/200 - (74%)
• Gaps: 5/200 - (2%)

  Fly     6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 70
            ||.||||||||||||||:|:|.||:||.:|.::|||||:||||:|:||.||.|||||||||||||
  Rat     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKE 135
            |.|||:||||||.||::|||:|:::|:.|:.:||:.||.:|:|:|.|:::|||.|:|.|:||:..
  Rat    70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNT 134

  Fly   136 RGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQER--VIIDRRNQEKAPG 198
            ..:..|...|:.|:|||||:..|:|:||..:| |.:.|..|..:|...||  :.||....:.|.|
  Rat   135 TAKEFADSLGVPFLETSAKNATNVEQAFMTMA-AEIKKRMGPGAASGGERPNLKIDSTPVKSASG 198

  Fly   199 YSKCC 203
              .||
  Rat   199 --GCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab10	NP_523419.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	97/165 (59%)
Rab1b	NP_001103449.1	Rab1_Ypt1	7..172	CDD:206661	96/165 (58%)
		Effector region. /evidence=ECO:0000255	37..45		5/7 (71%)
		Switch 2 region, required for interaction with REP1/CHM. /evidence=ECO:0000250|UniProtKB:Q9H0U4	64..83		16/18 (89%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	173..201		8/29 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910