DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17068 and RGD1560554

DIOPT Version :9

Sequence 1:NP_608379.1 Gene:CG17068 / 33024 FlyBaseID:FBgn0031098 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_038959853.1 Gene:RGD1560554 / 502576 RGDID:1560554 Length:364 Species:Rattus norvegicus


Alignment Length:201 Identity:54/201 - (26%)
Similarity:78/201 - (38%) Gaps:39/201 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WQNGLTELKDRGQYLLHSEKWADCRFLVGSSPTQRLIAGHKLLLAMASPVFERMF-YGNLPDKTD 68
            |:|.|               :.||..:|....    ...||.:||..||||..|| :..|...|:
  Rat   182 WENSL---------------FTDCSLVVAGQE----FRAHKAILAARSPVFRAMFEHEMLESLTN 227

  Fly    69 PIVIPDVQPEAFEAMLEYIYTDRIT-IGSFDKACELCYVAKKYMLPHVVTRCTHFLWADLSPKNA 132
            .|.|.|:..:.|:.|:.:|||.:.. :.|...|.||...|..|.|..:...|...|..:||.|.|
  Rat   228 RIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTA 292

  Fly   133 CRAYEFAKLFDEPRLMQSSMDLIAANTREV---------------LSDPSFL---DIEVSTLMAI 179
            ......|.|.....|....||.|..:..||               |::.:||   .|:.|:|...
  Rat   293 VPTLILADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLAEEAFLSLASIQCSSLEPS 357

  Fly   180 LDQNRL 185
            |.:.::
  Rat   358 LKRQKV 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17068NP_608379.1 BTB 19..123 CDD:279045 31/105 (30%)
BTB 27..127 CDD:197585 32/101 (32%)
BACK 136..>199 CDD:197943 15/68 (22%)
RGD1560554XP_038959853.1 MATH 16..153 CDD:351761
BTB_POZ 165..292 CDD:365784 38/128 (30%)
BACK 287..352 CDD:421692 16/64 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337460
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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