DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Peritrophin-A and CG5897

DIOPT Version :10

Sequence 1:NP_523418.1 Gene:Peritrophin-A / 33023 FlyBaseID:FBgn0022770 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001356901.1 Gene:CG5897 / 39346 FlyBaseID:FBgn0036220 Length:343 Species:Drosophila melanogaster


Alignment Length:250 Identity:53/250 - (21%)
Similarity:85/250 - (34%) Gaps:87/250 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FQVCSVLILA--------------WIACGHALAVGSP-ECPEKYGVQAYAHTENCDQFFLCTNGT 53
            |.:|.:|.:.              |...|:   :|.| :|      ||:.:.::        |..
  Fly     8 FHLCVILAIVAEIRGFSMEDKCKLWAGTGY---IGDPSDC------QAWGYCQD--------NKL 55

  Fly    54 LTLETCENGLLF---DG--KGAVHNHCNYNWAVDCKGRQ-WDPTPISTPACEYQFGLYAVSKDCS 112
            :...:|..|||:   ||  |.|....|:...:..|...: |:  .::.||            || 
  Fly    56 IDRRSCTEGLLYSFRDGTCKRASDTICHSQLSEICASLEPWN--YVANPA------------DC- 105

  Fly   113 TTYIKCAH-GEPHEQDCDAGLAYD-------ERIHGCNWPDQLLEHCNPEAVVGFKCPTKVDPNS 169
            ..::|||. .:|...||..|..:.       |.:.||. .|.:..|....:.||       ||.|
  Fly   106 RRFVKCADLDDPTWGDCGVGQVFSNKKQTCLEEVAGCP-QDNICSHMKDGSFVG-------DPKS 162

  Fly   170 VAARFWPFPRFPVAGDCHRLITCVEGHPRLISCGEDKVFDEHTLTCED--PEYAS 222
                            |.....|..|...:::|...:.|:..|..|:.  |.|.|
  Fly   163 ----------------CQIYYKCHNGFGTMLNCSVGRYFNRKTGNCQSWMPHYCS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Peritrophin-ANP_523418.1 CBM_14 36..83 CDD:426342 11/51 (22%)
CBM_14 103..147 CDD:426342 13/51 (25%)
ChtBD2 179..218 CDD:214696 7/40 (18%)
CG5897NP_001356901.1 ChtBD2 146..192 CDD:214696 12/68 (18%)

Return to query results.
Submit another query.