DRSC/TRiP Functional Genomics Resources

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Protein Alignment Peritrophin-A and CG4835

DIOPT Version :9

Sequence 1:NP_523418.1 Gene:Peritrophin-A / 33023 FlyBaseID:FBgn0022770 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:201 Identity:52/201 - (25%)
Similarity:70/201 - (34%) Gaps:45/201 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HTENCDQFFLCTNGTLTLETCENGLLFDGKGAVHNHCNYNWAVDC------KGRQWDPTPISTPA 97
            :.:||..|.:|.....|::.|...|.:|.|   ...|||..||:|      .....|.|...|| 
  Fly    62 YPDNCSLFLVCDCLYPTVKLCPANLWWDNK---TQQCNYPQAVECIYYSIETPEPTDGTTRFTP- 122

  Fly    98 CEYQFGLYAVSKDCSTTYIKCAHGEPHEQDCDAGLAYDERIHG------CNWPDQLLEHCN---P 153
                      ....||..|.   .||.|..........|...|      .:.|...|...:   |
  Fly   123 ----------EPTSSTQKIT---PEPTEPPSSTAKITTESTTGTSTEITSSTPSSYLPTSSWDPP 174

  Fly   154 EAVVGFK---CPTKVDPNSVAARFWPFPRFPVAGDCHRLITCVEGHPRLISCGEDKVFDEHTLTC 215
            .|..|..   |..|.|.   :..::|:       ||...|.|..|.|.|..|.|||||:::...|
  Fly   175 PAPPGISDDYCRNKEDG---SVHYYPY-------DCQAYINCTYGWPVLNYCIEDKVFNKYLGIC 229

  Fly   216 EDPEYA 221
            :.|:.|
  Fly   230 DTPDMA 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Peritrophin-ANP_523418.1 CBM_14 36..83 CDD:279884 14/43 (33%)
CBM_14 103..147 CDD:279884 9/49 (18%)
ChtBD2 179..218 CDD:214696 14/38 (37%)
CG4835NP_647965.3 CBM_14 51..103 CDD:279884 14/43 (33%)
CBM_14 185..237 CDD:279884 20/61 (33%)
CBM_14 273..322 CDD:279884
CBM_14 393..444 CDD:279884
CBM_14 485..539 CDD:279884
CBM_14 585..638 CDD:279884
CBM_14 661..714 CDD:279884
CBM_14 744..796 CDD:279884
CBM_14 914..962 CDD:279884
CBM_14 1175..1212 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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