DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-A and obst-H

DIOPT Version :9

Sequence 1:NP_001245778.1 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster


Alignment Length:247 Identity:53/247 - (21%)
Similarity:85/247 - (34%) Gaps:80/247 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFLCAIAVTLCVATTVSAANF-ECP-KPNGQFADEVQ-CDKFYVCDDGVAKAKLCPDGLVFDP 62
            |..:|..:.:.|..::.::|.:| ||. ..:|.|....: |..:..|:...:....|.||..|| 
  Fly     1 MSKYLIHLCLVLLWSSRINADHFDECDGMDDGAFVQSWESCQSYVYCEGEESLKGDCEDGEYFD- 64

  Fly    63 LNRKFNKCDQPFNVDC-----------EDRTELQE---------------------------PKS 89
              .:...||...||.|           |..|:.:|                           |..
  Fly    65 --SEAGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEIPATPRPTEPPIVETPTEVDIINIAPVV 127

  Fly    90 SKYCPRKNGFFAHPDPA---------VCNIFYNCIEGDALETKCTVGLHFDEYSGTCVWPDTAKR 145
            ...||..:      ||.         .|..:|.|..|.|:|..|...|:|:..:|.|.:||..: 
  Fly   128 RPNCPISD------DPGQVIFMASNNSCTNYYLCYHGHAMEMHCDNELYFNSLTGQCDYPDKVQ- 185

  Fly   146 EGCNPEQRTSETGFVCPKDQPKTDDRGQVVTHPK--YPHPTDCQKFYVCLNG 195
                           |..:.|::.   :.:.|..  :|||.:|..||.|:.|
  Fly   186 ---------------CAFEDPRSH---KCLPHMTEFFPHPDNCNYFYYCIKG 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-ANP_001245778.1 CBM_14 27..77 CDD:366726 12/50 (24%)
CBM_14 95..143 CDD:366726 15/56 (27%)
CBM_14 180..225 CDD:366726 8/16 (50%)
obst-HNP_001034020.1 CBM_14 26..77 CDD:279884 13/53 (25%)
CBM_14 142..184 CDD:279884 13/41 (32%)
ChtBD2 203..240 CDD:214696 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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