DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-A and cpg-2

DIOPT Version :10

Sequence 1:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:230 Identity:56/230 - (24%)
Similarity:84/230 - (36%) Gaps:57/230 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PNGQFADEVQCDKFYVCDDGVAKAKLCPDGLVFDPLNRKFNKCDQPFNV-DCEDRTELQEPKSSK 91
            |||     |....|..|..|:|:...||..|||:|   ....||.|.:| :|   ..|..|:.: 
 Worm   256 PNG-----VCSTNFLTCSGGIARIMDCPASLVFNP---TILVCDWPRDVAEC---AGLPTPQPT- 308

  Fly    92 YCPRKNGFFAHPDPAVC-NIFYNCIEGDALETKCTVGLHFDEYSGTCVWPD-------------- 141
             | .::|:|:.   ..| :.|..|..|.|:...|..||.|.|.:..|.:..              
 Worm   309 -C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESG 368

  Fly   142 --TAKREGCNPEQRTSETGFVCPKDQPKTDDRGQVVTHPKYPHPTDCQKFYVCLNGEDPRDLGCQ 204
              :.::.|....:.:.|.......:....:::.|.|......|...|          .||.|.||
 Worm   369 EASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGC----------SPRVLSCQ 423

  Fly   205 LGE----------VYNDATEMCDAPENVPGC--ED 227
            .|.          |:||.:.:||.|:....|  ||
 Worm   424 NGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIED 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-ANP_608378.2 CBM_14 27..77 CDD:426342 18/49 (37%)
CBM_14 95..143 CDD:426342 13/64 (20%)
CBM_14 180..225 CDD:426342 14/54 (26%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:426342
CBM_14 138..190 CDD:426342
ChtBD2 245..293 CDD:214696 16/44 (36%)
CBM_14 311..359 CDD:426342 13/50 (26%)
CBM_14 403..454 CDD:426342 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.

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