DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phf7 and phf11

DIOPT Version :9

Sequence 1:NP_001259740.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_021334650.1 Gene:phf11 / 569187 ZFINID:ZDB-GENE-081104-417 Length:531 Species:Danio rerio


Alignment Length:552 Identity:109/552 - (19%)
Similarity:181/552 - (32%) Gaps:169/552 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ICVLCLSGERDELIFGTVHVEGNMMVHRNCLYLSSNLIQRGEKKL-SIMNFLKEDIEAEVNRCRL 67
            ||.||.:.:..|.. |.:..:.::..|:|||..|||:..:..... .:..|..||::.|..|.:.
Zfish    13 ICALCKTSDETETT-GPLSSKEDISAHQNCLLFSSNIYCKNSPTYDDLFGFDLEDVKKEQRRGQK 76

  Fly    68 LKCCYCRRLGANIWCCKSGCRRTFHTKCGV--DNLAQNQF-CDTYNSFCHQHVLVPRNRPVFKND 129
            |:|.:|.:.||.:.|....|.|:||..|.:  |..|...| ..||..:|..|    ...|:..||
Zfish    77 LRCYFCNKTGATVGCEIKRCPRSFHYPCAIKADARAIEDFSTGTYRVYCKSH----DPNPIEIND 137

  Fly   130 EECLLCAEDVVAKGERFSVVTCLYAPCCRNGWFHRRCLQRYANSSGYFFKCPLCNNTDVFRRVAY 194
            |                                                   :.|:.|:.     
Zfish   138 E---------------------------------------------------IDNDVDLV----- 146

  Fly   195 MGIAVLDQDASWE----TEPDAFAGQYRRDVNCTAALCVAVSGRADTSAMLLYCTSCGANPSHYL 255
              :|.:::....|    :.||....:...:|...|.   |.|....||..    .|||......:
Zfish   147 --LASVEKHVPAEQHNQSTPDPERTRPSEEVKTPAK---ASSNGGLTSDQ----RSCGTADKRRI 202

  Fly   256 CTLKTLQNYVCKVCSAVSPEAVPVAESDSDDAGSMDDSAEAPRPGHLNGDQIQEKLSPSHWDDFG 320
                                     |.||.:..          |.|....:.::|....:.|:..
Zfish   203 -------------------------ECDSQEHS----------PEHKTPTKKKKKRRLEYPDNEN 232

  Fly   321 SSDDDAVFQRAFDTKVQSRVVTLSDDQPSTSAGARALADRGTRTFESQGTQT-----------TF 374
            .:..|||.........:|..|    :||:.|..    ....||:.|.....|           |.
Zfish   233 PTSADAVMAPEVSAPEESMTV----NQPNHSTP----LPENTRSCEKLNLSTTGAAADDEDDETD 289

  Fly   375 LSSVVTSFRSATATATSSTSTSTST-------------SASTLDNQENTEPSTSNGRRPWRPRYV 426
            :.||..|..:.|.......|.|..|             |..:|:::.:.|..:|....| ...:|
Zfish   290 IESVSLSVLNKTHLRHIEESQSVLTYETDPVPCIVILDSGPSLESEISLESCSSRNPSP-AHEFV 353

  Fly   427 SPPRHVSDSDDDSDEYDSDEYESKRRQLTPTAAAPSNGRRLLG-SISPEPSTP------------ 478
            :.|:        .::....:..|..:.:||...||:..|...| |:||:..:|            
Zfish   354 TVPK--------QEKITPTDRTSPAQTVTPQVPAPNQKRVSDGPSVSPQHPSPTAGLRISAVCTL 410

  Fly   479 APRVLRRRTLANRPSSLANMDI-SCVAN-RTR 508
            |...:::..|::.|:.::..|. |.|.| :||
Zfish   411 AQSAIKKEQLSDPPAEVSTSDSQSTVPNCQTR 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phf7NP_001259740.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 34/114 (30%)
phf11XP_021334650.1 ePHD_PHF6_like 14..128 CDD:277143 34/114 (30%)
Herpes_BLLF1 <228..445 CDD:330317 48/232 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574384
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12420
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.800

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