DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phf7 and kmt2ba

DIOPT Version :9

Sequence 1:NP_001259740.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_689347.5 Gene:kmt2ba / 560856 ZFINID:ZDB-GENE-060503-376 Length:2863 Species:Danio rerio


Alignment Length:540 Identity:109/540 - (20%)
Similarity:164/540 - (30%) Gaps:211/540 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VHVEGNMMVHRNCLYLSSNLIQRGEKKLSIMNFLKEDIEAEVNRCRLLKCCYCRRLGANIWCCKS 85
            :::..|...|.||...|:.:.:.....|        .:.:.|.|.|.::|..|.:.||.:.||.:
Zfish  1407 LYIGQNEWAHVNCCIWSAEVQETNGALL--------HVHSAVARGRFMRCERCGQTGATVGCCLT 1463

  Fly    86 GCRRTFHTKCGVDNLAQNQFCDTYNSFCHQHVLVPRNRPVFKNDEECLLCAEDVVAKGERFSVVT 150
            .|:..:|..|     |:...|                  ||::|::                 |.
Zfish  1464 SCQSNYHFMC-----ARASNC------------------VFQHDKK-----------------VY 1488

  Fly   151 CLYAPCCRNGWFHRRCLQRYANSSGYFFKCPLCNNTDVFRR--VAYMGIAVLDQDASWETEPDA- 212
            |         :.||..:    ||     |....|..:|.||  |.:.||: |.:......||:: 
Zfish  1489 C---------YKHRELI----NS-----KIEQGNGFEVVRRVYVDFDGIS-LRRKFLTGLEPESV 1534

  Fly   213 ---FAGQYRRDVNCTAALCVAVSGRADTSAMLLYCTSCGANPSHYLCT---LKTLQ-----NYVC 266
               ....:.:::.....|. |.||:       ||       |..|.|:   ..|:.     .|.|
Zfish  1535 NVMIGSLHVKNLGVLTELS-ANSGK-------LY-------PVGYQCSRWYWSTVDPRRRCRYTC 1584

  Fly   267 KVCSAVSPEA-------------------VPVAESDSD--------------------------- 285
            || |.|.|..                   .|.|::|.|                           
Zfish  1585 KV-SEVRPSTRCRTPSFMVDQGENHTIVHSPKAQNDEDGTDSESFSPGLPLSTPSKTKQDSGSGG 1648

  Fly   286 ----------DAGSMDDSAEAPRPGHLNGDQIQEKLSPSHWDDFGSSDDDAVFQRAFDTKVQSRV 340
                      .||.|  |...|.||:        .||.||                       .:
Zfish  1649 RTPGYPHSRRPAGGM--SRPLPSPGN--------ALSTSH-----------------------HI 1680

  Fly   341 VTLSDDQPSTSAGARALADRGTRTFESQGTQTTFLS--SVVTSFRSATATATS--STSTSTSTSA 401
            :|:||            .|...|:.....|::...|  .|:.|...|..:..|  ..|.|.|...
Zfish  1681 LTISD------------LDETRRSTRRHSTRSRNASPPPVILSGPMALRSGGSINPRSLSFSPPV 1733

  Fly   402 STLDNQENTEPSTSNGRRPWRPRYVSPPRHVSDSD-------DDSDEYDSDEYESKRRQLTPTAA 459
            |.|...||. .||::.||..||..:||...:|...       ..|....|..:.|.|.| .|...
Zfish  1734 SPLGATENL-MSTTSPRRRGRPPSLSPSSIISGPSPPQAALRSPSSALPSTVHHSPRLQ-QPFTT 1796

  Fly   460 APSNGRRLLGSISPEPSTPA 479
            :|....:::.....||...|
Zfish  1797 SPHKTDKVVQDFLSEPEEAA 1816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phf7NP_001259740.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 20/94 (21%)
kmt2baXP_689347.5 zf-CXXC 780..823 CDD:251032
PHD_SF 1016..1062 CDD:304600
PHD_SF 1064..1112 CDD:304600
PHD_SF 1149..1206 CDD:304600
Bromo_ALL-1 1187..1334 CDD:99925
PHD_SF 1389..1492 CDD:304600 25/141 (18%)
FYRN 1540..1586 CDD:283589 12/60 (20%)
FYRC 2561..2646 CDD:295414
SET <2677..2863 CDD:225491
SET 2725..2845 CDD:214614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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