DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phf7 and pie

DIOPT Version :9

Sequence 1:NP_001259740.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster


Alignment Length:530 Identity:138/530 - (26%)
Similarity:216/530 - (40%) Gaps:129/530 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CVLCLSGERDELIFGTVHVEGNMMVHRNCLYLSSNLIQRGEKKLSIMNFLKEDIEAEVNRCRLLK 69
            |::|...:.|:|:||...:..|:.||..||.||::|.|||.....|:.||..||..|.......|
  Fly     9 CLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGDSSGILGFLLRDIREEAAAAEKRK 73

  Fly    70 CCYCRRLGANIWCCKSGCRRTFHTKCGVDNLAQNQFCDTYNSFCHQHVLVPRNRPV--FK----- 127
            |.||.::||::.|.:  ||..||.|||::|.|..:||..|.|:|:      :.||:  :|     
  Fly    74 CWYCNKIGASLQCDR--CRSLFHLKCGLENRAVFEFCGQYKSYCY------KCRPMDDYKRQLQS 130

  Fly   128 ---NDEECLLCAEDVVAKGERFSVVTCLYAPCCRNGWFHRRCLQRYANSSGYFFKCPLCNNTDVF 189
               .:..|.:|...:. |.|...||   |..|||.|:.|::|:::||.:|||:.:|..|.:....
  Fly   131 NPPRNATCPICFSSIY-KVELHCVV---YGDCCRLGFAHKKCMRQYALTSGYYLRCIWCRSERFR 191

  Fly   190 RRVAYMGIAVLDQDASWETEPDAFAGQYRRDVNCTAALCVAVSGRA--DTSAMLLYCTSCGANPS 252
            ..:....:.|.|:||:||.:.:|:...:.|::.|....|:..|||.  ..|.::|.|:||.|..:
  Fly   192 DSIRLQSVFVPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRTYNRLSWVILCCSSCAATSA 256

  Fly   253 HYLCTLKTLQ--------NYVCKVCSAVSPEAVPVAESDSDDAGSMDDSAEAPRPGHLNGDQIQE 309
            |..|.:..|:        ::.|.:|..|...   :||..:    ...:...|.....::|....:
  Fly   257 HLKCLVGALRLPKKRERTDFKCSMCLDVERR---IAEGPA----RTTEETNADGDNQVDGSFYVQ 314

  Fly   310 KLSPSHWDDFGSSDDDAVFQRAFDTKVQSRVVTLSDDQPSTSAGARALADRGTRTFESQGTQTTF 374
            ||.|                                             |..||:.    |||..
  Fly   315 KLGP---------------------------------------------DAATRSL----TQTPV 330

  Fly   375 LSSVVTSFRSATATATSSTSTSTSTSASTLDNQENTEPSTSNGRRPWRPRYVSPPR-----HVSD 434
            .|....|.||:..|...|...|.:||...                     .:|||:     .:.|
  Fly   331 FSEEDESERSSNITVIFSQPKSNATSERL---------------------SLSPPQEEMIVEIPD 374

  Fly   435 SDDDSDEYDSDEYES----KRRQLT----PTAAA--PSNGRRLLGSISPE-PSTPA----PRVLR 484
            |.:.|.:...||..|    .||..:    |.||:  |.:.:....|..|: |.|.|    |.:.:
  Fly   375 SPEASPKTSIDENHSPQPIARRDTSDSPQPIAASEIPDSPQPTAASEIPDLPQTTAINVNPELTQ 439

  Fly   485 RRTLANRPSS 494
            :..|...|.|
  Fly   440 QTALNTIPHS 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phf7NP_001259740.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 44/110 (40%)
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 44/115 (38%)
PHD_SF 224..>260 CDD:304600 12/35 (34%)
PARM 318..>491 CDD:293666 40/202 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438951
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110264at33208
OrthoFinder 1 1.000 - - FOG0003998
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106451
Panther 1 1.100 - - P PTHR12420
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3283
87.750

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