DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phf7 and Tcf20

DIOPT Version :9

Sequence 1:NP_001259740.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_006242172.1 Gene:Tcf20 / 366964 RGDID:1594486 Length:1992 Species:Rattus norvegicus


Alignment Length:126 Identity:28/126 - (22%)
Similarity:45/126 - (35%) Gaps:38/126 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GERDELIFGTVHVEGN-MMVHRNC------LYLSSNLIQRGEKKLSIMNFLKEDIEAEVNRCRLL 68
            |...||....:.::.| ..||..|      :||....:...::.|.|              .|.:
  Rat  1867 GPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEI--------------AREM 1917

  Fly    69 KCCYCRRLGANIWCCKSGCRRTFHTKCGVDNLAQNQFCDTYNSFCHQH-----VLVPRNRP 124
            ||.:|:..||.:.|...||...:|..|.:|            :.|..|     |..|:::|
  Rat  1918 KCSHCQEAGATLGCYNKGCSFRYHYPCAID------------ADCLLHEENFSVRCPKHKP 1966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phf7NP_001259740.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 24/111 (22%)
Tcf20XP_006242172.1 ePHD_TCF20 1737..1964 CDD:277169 27/122 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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