DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phf7 and kmt2b

DIOPT Version :9

Sequence 1:NP_001259740.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_002940678.3 Gene:kmt2b / 100144721 XenbaseID:XB-GENE-853845 Length:2817 Species:Xenopus tropicalis


Alignment Length:605 Identity:122/605 - (20%)
Similarity:190/605 - (31%) Gaps:199/605 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CVLCLS-GERDELIFG-TVHVEGNMMVHRNCLYLSSNLIQRGEKKLSIMNFLKEDIEAEVNRCRL 67
            |.|||. |:.|....| .:::..|...|.||...|:.:.:..:..|       :::.|.|.|.|.
 Frog  1617 CALCLKYGDDDPKDAGRLLYIGQNEWTHINCAIWSAEVFEENDGSL-------KNVHAAVARGRQ 1674

  Fly    68 LKCCYCRRLGANIWCCKSGCRRTFHTKCGVDNLAQNQFCDTYNSFCHQHVLVPRNRPVFKNDEEC 132
            |:|..|:::||.:.||.|.|...||..|.  ..::..|.|....||.:|..:....||   :|:|
 Frog  1675 LRCDNCQKIGATVGCCLSTCHSNFHFMCA--RASRCCFQDDKKMFCSKHTKLLDGTPV---EEDC 1734

  Fly   133 LLCAEDVVAKGERFSVVTCLYAPCCRNGWFHRRCLQ-------------RYANSSGYF------- 177
            ......|....|..|              |.|:.||             ...:|.|..       
 Frog  1735 FDVLRRVYVDFEGIS--------------FRRKFLQGLEPDHIHMMIGSMKIDSLGMLNDLSVTE 1785

  Fly   178 -------FKCP-LCNNTDVFRRVAYMGIAVLDQ-DASWETEPDAFAGQYRR------------DV 221
                   ::|. |..:|...||..:....||:. ..|.||.|:...||.:.            ..
 Frog  1786 GKIYPVGYQCSRLYWSTQDARRQCWYKCRVLEHCPNSGETHPEGGEGQEQNKTIVHSPGPLPDPT 1850

  Fly   222 NCTAALCVAVSGRADTSAMLLYCTSCGANP------------SHYLCTLKTLQNYVCKVCSAVSP 274
            ...||....:.  ||||      :|||..|            |.....:|| .||        ||
 Frog  1851 EMEAAFSPPLP--ADTS------SSCGQPPPLQPNTSATAPRSFIGARMKT-PNY--------SP 1898

  Fly   275 EAVPVAESDSDDAGSMDDSAEAPRPGHLNGDQI------------------QEKLSPSHWDDFGS 321
            ...|:..|          |...|.||......:                  :..:.||.::  ..
 Frog  1899 SRRPLGGS----------SRPLPSPGSPTSSSLSHHILTVSDPEVTPLRRTRRPVPPSRFN--AP 1951

  Fly   322 SDDDAVFQRAFDTKVQSRVV-----TLSDDQP--------------STSAGARALADRGTRTFES 367
            |...:..:....:.:.:|.|     |..::.|              |:|.|...|...|.:....
 Frog  1952 SSTRSPEETTSPSPLPARPVIRHRATSENEVPTPASCGGASEVEVMSSSDGGALLGPCGAQLIVG 2016

  Fly   368 QGTQTTFLSSVVTSFRSATATATSSTS-TSTSTSASTL------------DNQENTE-------- 411
            ....::........:...|.|..|... :|...|||::            |:::.::        
 Frog  2017 SEGDSSSEEDADDQYYGLTRTVVSGDKISSMPASASSVHIRQLDGIHDSTDSEDGSQGPCGPIGG 2081

  Fly   412 -------PS---------TSNGRRPWRPRYVSPPRHVSDSDDDSDEYDSDEYESKRRQLTPTAAA 460
                   ||         |.|.....:..::.||..|:.|...|...:.|            |..
 Frog  2082 GKTPSHIPSEIVEFVLKNTGNSESSIQLHHIGPPASVASSSSSSSAQNGD------------ATL 2134

  Fly   461 PSNGRRLLGSISPEPSTPAP 480
            .|||.   |::|.:||...|
 Frog  2135 LSNGN---GAVSRQPSQGPP 2151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phf7NP_001259740.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 33/112 (29%)
kmt2bXP_002940678.3 zf-CXXC 1011..1058 CDD:366873
PHD1_KMT2B 1233..1279 CDD:277064
PHD2_KMT2A_like 1281..1330 CDD:276982
PHD3_KMT2B 1367..1423 CDD:277068
Bromodomain 1406..1548 CDD:413371
ePHD_KMT2B 1617..1721 CDD:277164 33/112 (29%)
FYRN 1768..1815 CDD:399155 7/46 (15%)
PHA03307 1824..>2091 CDD:223039 49/295 (17%)
PHA03247 <2141..2441 CDD:223021 4/11 (36%)
FYRC 2512..2595 CDD:399156
SET_KMT2A_2B 2664..2817 CDD:380947
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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