DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab6a

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_038948673.1 Gene:Rab6a / 84379 RGDID:619737 Length:211 Species:Rattus norvegicus


Alignment Length:154 Identity:66/154 - (42%)
Similarity:103/154 - (66%) Gaps:3/154 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTI 73
            |||:.:|:..|||:||:.||..|:|..:|..|||:||..:|:.:|...|:||:||||||||||::
  Rat    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    74 TSTYYRGTHGVIVVYDVTNGESFANVRRWLEEI--QNNCDVVKKVLVGNKNDDPDRKVVITEDAQ 136
            ..:|.|.:...:||||:||..||....:|::::  :...||: .:|||||.|..|::.|..|:.:
  Rat    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI-IMLVGNKTDLADKRQVSIEEGE 142

  Fly   137 RFAKQMDIELFETSAKDNINVENM 160
            |.||::::...|||||...||:.:
  Rat   143 RKAKELNVMFIETSAKAGYNVKQL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 66/154 (43%)
Rab6aXP_038948673.1 Rab6 14..173 CDD:206654 66/154 (43%)

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